Factsheet for Os03t0163300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

mitochondrion: 23257241
plastid: 23257241
mitochondrion: 23783412
plastid: 23783412

plastid: 17189339
extracellular: 23159799
extracellular: 28232208

gfp PMID: 23257241 doi

L Xu, C Carrie, SR Law, MW Murcha, J Whelan

Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia.

gfp PMID: 23783412 doi

TM Wu, WR Lin, YT Kao, YT Hsu, CH Yeh, CY Hong, CH Kao

Department of Agricultural Chemistry, National Taiwan University, Taipei, 10617, Taiwan.

msms PMID: 23159799 doi

SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang

Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

msms PMID: 28232208 doi

Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0754500-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54660.1	Os02t0754500-01	AT5G09420.1	17981999

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95455	Sorghum	plastid	86.67	87.45
TraesCS4B01G278900.1	Wheat	plastid	86.31	87.09
Zm00001d027769_P001	Maize	plastid	85.95	86.73
TraesCS4A01G025200.1	Wheat	golgi	85.95	86.73
TraesCS4D01G277400.1	Wheat	golgi	86.13	86.59
HORVU4Hr1G073930.1	Barley	mitochondrion, plastid	86.13	81.02
Os10t0415300-02	Rice	plastid	77.12	77.26
GSMUA_Achr3P29340_001	Banana	plastid	75.68	75.13
PGSC0003DMT400019491	Potato	cytosol, extracellular, plastid	71.89	71.76
VIT_07s0141g00390.t01	Wine grape	plastid	72.07	71.56
AT3G54660.1	Thale cress	plastid	72.43	71.15
KRH71329	Soybean	plastid	69.73	71.01
KRH32102	Soybean	plastid	69.73	71.01
CDY69892	Canola	plastid	71.71	70.82
Solyc09g065900.2.1	Tomato	plastid	70.99	70.74
CDX73461	Canola	plastid	71.35	70.59
Bra007087.1-P	Field mustard	plastid	71.17	70.16
CDX94793	Canola	endoplasmic reticulum	20.18	67.07
CDY13217	Canola	plastid	70.63	65.12
KRH71332	Soybean	cytosol	14.41	64.52
CDX76141	Canola	plastid	69.55	63.8
Bra014801.1-P	Field mustard	plastid	70.45	63.58
GSMUA_Achr9P21540_001	Banana	cytosol	15.86	55.0
Os02t0813500-01	Rice	cytosol, plasma membrane	47.39	53.02
Os01t0337900-01	Rice	plastid	28.47	28.16
Os01t0328700-01	Rice	mitochondrion	24.32	26.84
Os05t0156700-01	Rice	plastid	10.81	25.75

Protein Annotations

KEGG:00480+1.8.1.7	MapMan:10.4.1.4	Gene3D:3.30.390.30	Gene3D:3.50.50.60	EntrezGene:4331719	ProteinID:AAM15796.1
ProteinID:AAN06855.1	ProteinID:ABF94128.1	EMBL:AK103418	ProteinID:BAF10971.1	ProteinID:BAS82440.1	ProteinID:EAZ25686.1
InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166	GO:GO:0000305	GO:GO:0003674
GO:GO:0003824	GO:GO:0004362	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006091	GO:GO:0006749	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016491
GO:GO:0016668	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0050660	GO:GO:0050661
GO:GO:0055114	GO:GO:0098869	InterPro:Glut-diS_reduct	InterPro:IPR016156	InterPro:IPR036188	EnsemblPlantsGene:Os03g0163300
EnsemblPlants:Os03t0163300-01	PFAM:PF02852	PFAM:PF07992	PIRSF:PIRSF000350	PRINTS:PR00368	PRINTS:PR00411
ScanProsite:PS00076	PANTHER:PTHR43256	PANTHER:PTHR43256:SF4	InterPro:Pyr_OxRdtase_I_AS	InterPro:Pyr_nuc-diS_OxRdtase	InterPro:Pyr_nucl-diS_OxRdtase_dimer
UniProt:Q8S5T1	SUPFAM:SSF51905	SUPFAM:SSF55424	TIGRFAMs:TIGR01424	UniParc:UPI00000ABF97	RefSeq:XP_015627860.1
RefSeq:XP_015627861.1	SEG:seg	:	:	:	:

Description

glutathione reductase 1Similar to Glutathione reductase (Fragment). (Os03t0163300-01)

Coordinates

chr3:+:3427553..3432223

Molecular Weight (calculated)

60256.3 Da

IEP (calculated)

7.674

GRAVY (calculated)

-0.156

Length

555 amino acids

Sequence
(BLAST)

001: MATTATLPFS CSSTLQTLTR TIPLRLRLHR RRFLHHLPSL AALPRLPLPR PPLLPHARRH VSASAAPNGA SSEGEYDYDL FTIGAGSGGV RASRFASTLY
101: GARAAVCEMP FATVASDDLG GVGGTCVLRG CVPKKLLVYG SKYSHEFEES HGFGWVYETD PKHDWNTLIA NKNTELQRLV GIYKNILNNS GVTLIEGRGK
201: IVDPHTVSVD GKLYTARNIL IAVGGRPSMP NIPGIEHVID SDAALDLPSK PEKIAIVGGG YIALEFAGIF NGLKSEVHVF IRQKKVLRGF DEEVRDFIAE
301: QMSLRGITFH TEQSPQAITK SNDGLLSLKT NKETIGGFSH VMFATGRKPN TKNLGLEEVG VKLDKNGAIM VDEYSRTSVD SIWAVGDVTD RVNLTPVALM
401: EGGAFAKTVF GDEPTKPDYR AVPSAVFSQP PIGQVGLTEE QAIEEYGDVD IYTANFRPLR ATLSGLPDRI FMKLIVCATT NKVVGVHMCG EDAPEIIQGV
501: AIAVKAGLTK QDFDATIGIH PTSAEEFVTM RNATRKVRRS TTDEVESKDK VVTQN

Best Arabidopsis Sequence Match ( AT3G54660.1 )
(BLAST)

001: MASTPKLTST ISSSSPSLQF LCKKLPIAIH LPSSSSSSFL SLPKTLTSLY SLRPRIALLS NHRYYHSRRF SVCASTDNGA ESDRHYDFDL FTIGAGSGGV
101: RASRFATSFG ASAAVCELPF STISSDTAGG VGGTCVLRGC VPKKLLVYAS KYSHEFEDSH GFGWKYETEP SHDWTTLIAN KNAELQRLTG IYKNILSKAN
201: VKLIEGRGKV IDPHTVDVDG KIYTTRNILI AVGGRPFIPD IPGKEFAIDS DAALDLPSKP KKIAIVGGGY IALEFAGIFN GLNCEVHVFI RQKKVLRGFD
301: EDVRDFVGEQ MSLRGIEFHT EESPEAIIKA GDGSFSLKTS KGTVEGFSHV MFATGRKPNT KNLGLENVGV KMAKNGAIEV DEYSQTSVPS IWAVGDVTDR
401: INLTPVALME GGALAKTLFQ NEPTKPDYRA VPCAVFSQPP IGTVGLTEEQ AIEQYGDVDV YTSNFRPLKA TLSGLPDRVF MKLIVCANTN KVLGVHMCGE
501: DSPEIIQGFG VAVKAGLTKA DFDATVGVHP TAAEEFVTMR APTRKFRKDS SEGKASPEAK TAAGV

Arabidopsis Description

EMB2360At3g54660 [Source:UniProtKB/TrEMBL;Acc:Q5FV38]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.