Factsheet for HORVU4Hr1G073930.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G078210.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54660.1	HORVU6Hr1G078210.1	AT5G09420.1	17981999

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G278900.1	Wheat	plastid	90.68	97.27
TraesCS4D01G277400.1	Wheat	golgi	90.85	97.1
TraesCS4A01G025200.1	Wheat	golgi	90.34	96.91
Os03t0163300-01	Rice	plastid	81.02	86.13
EER95455	Sorghum	plastid	79.15	84.91
Zm00001d027769_P001	Maize	plastid	78.31	84.0
GSMUA_Achr3P29340_001	Banana	plastid	68.81	72.63
PGSC0003DMT400019491	Potato	cytosol, extracellular, plastid	66.44	70.5
Solyc09g065900.2.1	Tomato	plastid	66.1	70.02
AT3G54660.1	Thale cress	plastid	66.78	69.73
KRH32102	Soybean	plastid	64.41	69.72
VIT_07s0141g00390.t01	Wine grape	plastid	65.93	69.59
CDY69892	Canola	plastid	66.27	69.57
KRH71329	Soybean	plastid	64.07	69.36
CDX73461	Canola	plastid	65.93	69.34
Bra007087.1-P	Field mustard	plastid	65.76	68.92
CDX94793	Canola	endoplasmic reticulum	18.31	64.67
CDY13217	Canola	plastid	65.93	64.62
CDX76141	Canola	plastid	64.58	62.98
Bra014801.1-P	Field mustard	plastid	65.25	62.6
KRH71332	Soybean	cytosol	12.71	60.48
GSMUA_Achr9P21540_001	Banana	cytosol	14.92	55.0
HORVU6Hr1G089780.1	Barley	cytosol	26.1	50.16
HORVU1Hr1G023060.8	Barley	plastid	26.95	27.27
HORVU0Hr1G017540.7	Barley	peroxisome	14.41	26.15
HORVU1Hr1G013740.1	Barley	cytosol, mitochondrion	21.69	25.25
HORVU1Hr1G023630.1	Barley	cytosol, mitochondrion, plastid	22.88	24.77

Protein Annotations

KEGG:00480+1.8.1.7	MapMan:10.4.1.4	Gene3D:3.30.390.30	Gene3D:3.50.50.60	UniProt:A0A287PMW3	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004362
GO:GO:0005488	GO:GO:0005507	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016491	GO:GO:0016668
GO:GO:0019725	GO:GO:0045454	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	GO:GO:0098869
InterPro:Glut-diS_reduct	EnsemblPlantsGene:HORVU4Hr1G073930	EnsemblPlants:HORVU4Hr1G073930.1	InterPro:IPR016156	InterPro:IPR036188	PFAM:PF02852
PFAM:PF07992	PRINTS:PR00368	PRINTS:PR00411	ScanProsite:PS00076	PANTHER:PTHR43256	PANTHER:PTHR43256:SF4
InterPro:Pyr_OxRdtase_I_AS	InterPro:Pyr_nucl-diS_OxRdtase_dimer	SUPFAM:SSF51905	SUPFAM:SSF55424	TIGRFAMs:TIGR01424	UniParc:UPI000B470AAD
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:592215292..592220096

Molecular Weight (calculated)

63962.7 Da

IEP (calculated)

9.065

GRAVY (calculated)

-0.199

Length

590 amino acids

Sequence
(BLAST)

001: LYYSTHRQSS RLSPSFPLLT LPAAARRELG PRRKRERERA MATTAALPFS CAATLQTLTR TLSPRRSILI HRHRLRSLAA SPRLPDRPRA RLCRPVSASA
101: APNGSSSAGE YDYDLFTIGA GSGGVRASRF ASTLYGARAA ICEMPFSTIS ADDLGGLGGT CVLRGCVPKK LLVYASKFSH EFEESHGFGW TYDTDPKHDW
201: STLIANKNTE LQRLVGIYKN ILKNAGVDLI EGRGKVVDAH TVSVDGKLYT AKNILIAVGG RPSMPDLPGI EHVIDSDAAL DLPSKPEKIA IVGGGYIALE
301: FAGIFNGLKS DVHVFIRQPK VLRGFDEEVR DFIAEQMSLR GVTFHTEHSP QAITKSNDGL LSLKTNKETI GGFSHVMFAT GRKPNTKNLG LEEVGVKMDK
401: KGAIVVDEYS RTSVDSIWAV GDVTDRINLT PVALMEGGAF AKTVFGDEPT KPEYRAVPAA VFSQPPIGQV GLTEEQAIEE YGDVDVYLSN FRPLRATLSG
501: LPDRVLMKLI VCATTNKVVG VHMCGDDAPE IIQGIAIGVK AGLTKQDFDA TVGVHPTSAE EFVTMRSPTR KVRRKTAAEA ESKDEVVAQK

Best Arabidopsis Sequence Match ( AT3G54660.1 )
(BLAST)

001: MASTPKLTST ISSSSPSLQF LCKKLPIAIH LPSSSSSSFL SLPKTLTSLY SLRPRIALLS NHRYYHSRRF SVCASTDNGA ESDRHYDFDL FTIGAGSGGV
101: RASRFATSFG ASAAVCELPF STISSDTAGG VGGTCVLRGC VPKKLLVYAS KYSHEFEDSH GFGWKYETEP SHDWTTLIAN KNAELQRLTG IYKNILSKAN
201: VKLIEGRGKV IDPHTVDVDG KIYTTRNILI AVGGRPFIPD IPGKEFAIDS DAALDLPSKP KKIAIVGGGY IALEFAGIFN GLNCEVHVFI RQKKVLRGFD
301: EDVRDFVGEQ MSLRGIEFHT EESPEAIIKA GDGSFSLKTS KGTVEGFSHV MFATGRKPNT KNLGLENVGV KMAKNGAIEV DEYSQTSVPS IWAVGDVTDR
401: INLTPVALME GGALAKTLFQ NEPTKPDYRA VPCAVFSQPP IGTVGLTEEQ AIEQYGDVDV YTSNFRPLKA TLSGLPDRVF MKLIVCANTN KVLGVHMCGE
501: DSPEIIQGFG VAVKAGLTKA DFDATVGVHP TAAEEFVTMR APTRKFRKDS SEGKASPEAK TAAGV

Arabidopsis Description

EMB2360At3g54660 [Source:UniProtKB/TrEMBL;Acc:Q5FV38]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.