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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G025200.1 Wheat golgi 98.36 98.36
TraesCS4D01G277400.1 Wheat golgi 98.55 98.19
HORVU4Hr1G073930.1 Barley mitochondrion, plastid 97.27 90.68
Os03t0163300-01 Rice plastid 87.09 86.31
EER95455 Sorghum plastid 84.18 84.18
Zm00001d027769_P001 Maize plastid 83.64 83.64
GSMUA_Achr3P29340_001 Banana plastid 74.0 72.81
AT3G54660.1 Thale cress plastid 72.91 70.97
KRH32102 Soybean plastid 70.18 70.83
PGSC0003DMT400019491 Potato cytosol, extracellular, plastid 71.45 70.68
CDY69892 Canola plastid 72.18 70.64
CDX73461 Canola plastid 71.82 70.41
Solyc09g065900.2.1 Tomato plastid 71.27 70.38
KRH71329 Soybean plastid 69.45 70.09
Bra007087.1-P Field mustard plastid 71.64 69.98
VIT_07s0141g00390.t01 Wine grape plastid 70.91 69.77
CDX94793 Canola endoplasmic reticulum 20.18 66.47
CDY13217 Canola plastid 71.64 65.45
CDX76141 Canola plastid 70.18 63.8
Bra014801.1-P Field mustard plastid 70.91 63.41
KRH71332 Soybean cytosol 13.64 60.48
GSMUA_Achr9P21540_001 Banana cytosol 16.18 55.62
TraesCS6B01G423100.1 Wheat cytosol 46.18 51.11
TraesCS6B01G423000.1 Wheat cytosol 41.27 45.22
TraesCS1B01G124900.1 Wheat plastid 28.91 26.99
TraesCS1B01G131300.1 Wheat mitochondrion 24.18 26.49
TraesCS1B01G084700.1 Wheat mitochondrion 24.0 26.24
Protein Annotations
KEGG:00480+1.8.1.7MapMan:10.4.1.4Gene3D:3.30.390.30Gene3D:3.50.50.60InterPro:FAD/NAD-bd_sfInterPro:FAD/NAD-binding_dom
InterPro:FAD/NAD-linked_Rdtase_dimer_sfGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004362GO:GO:0005488
GO:GO:0005507GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005739GO:GO:0006749GO:GO:0008150GO:GO:0008152GO:GO:0009055GO:GO:0009507
GO:GO:0009536GO:GO:0009570GO:GO:0009987GO:GO:0016491GO:GO:0016668GO:GO:0019725
GO:GO:0045454GO:GO:0050660GO:GO:0050661GO:GO:0055114InterPro:Glut-diS_reductInterPro:IPR016156
InterPro:IPR036188PFAM:PF02852PFAM:PF07992PIRSF:PIRSF000350PRINTS:PR00368PRINTS:PR00411
ScanProsite:PS00076PANTHER:PTHR43256PANTHER:PTHR43256:SF4InterPro:Pyr_OxRdtase_I_ASInterPro:Pyr_nuc-diS_OxRdtaseInterPro:Pyr_nucl-diS_OxRdtase_dimer
SUPFAM:SSF51905SUPFAM:SSF55424TIGRFAMs:TIGR01424EnsemblPlantsGene:TraesCS4B01G278900EnsemblPlants:TraesCS4B01G278900.1SEG:seg
Description
No Description!
Coordinates
chr4B:+:562349013..562353047
Molecular Weight (calculated)
59570.5 Da
IEP (calculated)
7.914
GRAVY (calculated)
-0.168
Length
550 amino acids
Sequence
(BLAST)
001: MATTAALPFS CATTLQTLTR TLSPRRSLLI HRHRLRSLAA SPRLPDRPRP RLHRPVSASA APNGSSSAGE YDYDLFTIGA GSGGVRASRF ATTLYGARAA
101: ICEMPFSTIS ADDLGGLGGT CVLRGCVPKK LLVYASKFSH EFEESHGFGW TYDTDPKHDW STLIANKNTE LQRLVGIYKN ILKNANVDLI EGRGKVVDPH
201: TVSVDGKLYT AKNILIAVGG RPSMPDIPGI EHVIDSDAAL DLPSKPEKIA IVGGGYIALE FAGIFNGLKS DVHVFIRQPK VLRGFDEEVR DFVAEQMSLR
301: GITFHTEHSP QAITKSNDGL LSLKTNKETI GGFSHVMFAT GRKPNTKNLG LEEVGVKMDK KGAIVVDEYS RTSVDSIWAV GDVTDRINLT PVALMEGGAF
401: VKTLFGDEPT KPEYRAVPAA VFSQPPIGQV GLTEEQAIEE YGDVDVYLSN FRPLRATLSG LPDRVLMKLI VCATTNKVVG VHMCGDDAPE IIQGIAIGVK
501: AGLTKQDFDV TVGVHPTSAE EFVTMRNPTR KVRRKTAAEA ESKDEVVTQK
Best Arabidopsis Sequence Match ( AT3G54660.1 )
(BLAST)
001: MASTPKLTST ISSSSPSLQF LCKKLPIAIH LPSSSSSSFL SLPKTLTSLY SLRPRIALLS NHRYYHSRRF SVCASTDNGA ESDRHYDFDL FTIGAGSGGV
101: RASRFATSFG ASAAVCELPF STISSDTAGG VGGTCVLRGC VPKKLLVYAS KYSHEFEDSH GFGWKYETEP SHDWTTLIAN KNAELQRLTG IYKNILSKAN
201: VKLIEGRGKV IDPHTVDVDG KIYTTRNILI AVGGRPFIPD IPGKEFAIDS DAALDLPSKP KKIAIVGGGY IALEFAGIFN GLNCEVHVFI RQKKVLRGFD
301: EDVRDFVGEQ MSLRGIEFHT EESPEAIIKA GDGSFSLKTS KGTVEGFSHV MFATGRKPNT KNLGLENVGV KMAKNGAIEV DEYSQTSVPS IWAVGDVTDR
401: INLTPVALME GGALAKTLFQ NEPTKPDYRA VPCAVFSQPP IGTVGLTEEQ AIEQYGDVDV YTSNFRPLKA TLSGLPDRVF MKLIVCANTN KVLGVHMCGE
501: DSPEIIQGFG VAVKAGLTKA DFDATVGVHP TAAEEFVTMR APTRKFRKDS SEGKASPEAK TAAGV
Arabidopsis Description
EMB2360At3g54660 [Source:UniProtKB/TrEMBL;Acc:Q5FV38]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.