Factsheet for Bra007087.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009383.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54660.1	Bra009383.1-P	AT5G09420.1	17981999

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69892	Canola	plastid	98.4	98.58
AT3G54660.1	Thale cress	plastid	91.12	90.8
Bra014801.1-P	Field mustard	plastid	88.45	80.98
VIT_07s0141g00390.t01	Wine grape	plastid	77.44	78.0
KRH32102	Soybean	plastid	75.13	77.61
KRH71329	Soybean	plastid	74.78	77.25
Solyc09g065900.2.1	Tomato	plastid	74.78	75.58
PGSC0003DMT400019491	Potato	cytosol, extracellular, plastid	74.25	75.18
GSMUA_Achr3P29340_001	Banana	plastid	71.4	71.91
TraesCS4B01G278900.1	Wheat	plastid	69.98	71.64
TraesCS4D01G277400.1	Wheat	golgi	69.8	71.2
Os03t0163300-01	Rice	plastid	70.16	71.17
TraesCS4A01G025200.1	Wheat	golgi	69.45	71.09
Zm00001d027769_P001	Maize	plastid	68.74	70.36
EER95455	Sorghum	plastid	68.38	70.0
KRH71332	Soybean	cytosol	14.74	66.94
Os10t0415300-02	Rice	plastid	65.54	66.61
HORVU4Hr1G073930.1	Barley	mitochondrion, plastid	68.92	65.76
OQU91783	Sorghum	plastid	60.75	64.41
GSMUA_Achr9P21540_001	Banana	cytosol	15.99	56.25
Bra015006.1-P	Field mustard	cytosol	44.23	51.23
Bra001931.1-P	Field mustard	cytosol	43.69	50.83
Bra012738.1-P	Field mustard	peroxisome	10.83	29.33
Bra033540.1-P	Field mustard	plastid	27.0	27.0
Bra018700.1-P	Field mustard	mitochondrion	23.09	25.64
Bra022204.1-P	Field mustard	mitochondrion	22.91	25.6
Bra001645.1-P	Field mustard	plastid	27.35	24.92

Protein Annotations

KEGG:00480+1.8.1.7	MapMan:10.4.1.4	Gene3D:3.30.390.30	Gene3D:3.50.50.60	EnsemblPlantsGene:Bra007087	EnsemblPlants:Bra007087.1
EnsemblPlants:Bra007087.1-P	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004362	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091
GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0016491
GO:GO:0016668	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0050660	GO:GO:0050661
GO:GO:0055114	GO:GO:0098869	InterPro:Glut-diS_reduct	InterPro:IPR016156	InterPro:IPR036188	UniProt:M4CS95
PFAM:PF02852	PFAM:PF07992	PIRSF:PIRSF000350	PRINTS:PR00368	PRINTS:PR00411	ScanProsite:PS00076
PANTHER:PTHR43256	PANTHER:PTHR43256:SF4	InterPro:Pyr_OxRdtase_I_AS	InterPro:Pyr_nuc-diS_OxRdtase	InterPro:Pyr_nucl-diS_OxRdtase_dimer	SUPFAM:SSF51905
SUPFAM:SSF55424	TIGRFAMs:TIGR01424	UniParc:UPI000254292C	SEG:seg	:	:

Description

AT3G54660 (E=1e-278) GR, EMB2360, ATGR2 | GR (GLUTATHIONE REDUCTASE); ATP binding / glutathione-disulfide reductase

Coordinates

chrA09:-:27231834..27234488

Molecular Weight (calculated)

60572.2 Da

IEP (calculated)

7.834

GRAVY (calculated)

-0.164

Length

563 amino acids

Sequence
(BLAST)

001: MASTPKLTTT ISSSPSLQIL CRKLPIAINL PSSPTSPSLP KTLSHLSSLR LRAASVSNHR YYSSSSSRRF SVRAQNDNGA DSDRHYDFDL FTIGAGSGGV
101: RASRFATSYG ASAAVCELPF STISSETAGG VGGTCVLRGC VPKKLLVYAS KYTHEFEDSQ GFGWKYDTEP SHDWSTLIAN KNAELQRLTG IYKNILNNAN
201: VKLIEGRGKV IDPHTVDVDG KIYTSRNILI AVGGRPFIPD IPGREFAIDS DAALDLPSKP EKIAIVGGGY IALEFAGIFN GLGSEVHVFI RQKKVLRGFD
301: EDVRDFVGEQ MSLRGIEFHT EESPEAIIKA GDGSFSLKTS KGTVDGFSHV MFATGRKPNT KNLGLENVGL KLAKNGAIEV DEYSRTSVPS IFAVGDVTDR
401: INLTPVALME GMALAKTLFQ NDPTKPDYRA VPCAVFSQPP IGTVGLTEEQ AIEQYGDIDV FTSNFKPLKA TLSGLPDRVF MKLIVCANTN KVLGVHMCGE
501: DSPEIIQGFG VAVKAGLTKA DFDATVGVHP TAAEEFVTMR TPTRKIRKES SEGKASVEAK TAV

Best Arabidopsis Sequence Match ( AT3G54660.1 )
(BLAST)

001: MASTPKLTST ISSSSPSLQF LCKKLPIAIH LPSSSSSSFL SLPKTLTSLY SLRPRIALLS NHRYYHSRRF SVCASTDNGA ESDRHYDFDL FTIGAGSGGV
101: RASRFATSFG ASAAVCELPF STISSDTAGG VGGTCVLRGC VPKKLLVYAS KYSHEFEDSH GFGWKYETEP SHDWTTLIAN KNAELQRLTG IYKNILSKAN
201: VKLIEGRGKV IDPHTVDVDG KIYTTRNILI AVGGRPFIPD IPGKEFAIDS DAALDLPSKP KKIAIVGGGY IALEFAGIFN GLNCEVHVFI RQKKVLRGFD
301: EDVRDFVGEQ MSLRGIEFHT EESPEAIIKA GDGSFSLKTS KGTVEGFSHV MFATGRKPNT KNLGLENVGV KMAKNGAIEV DEYSQTSVPS IWAVGDVTDR
401: INLTPVALME GGALAKTLFQ NEPTKPDYRA VPCAVFSQPP IGTVGLTEEQ AIEQYGDVDV YTSNFRPLKA TLSGLPDRVF MKLIVCANTN KVLGVHMCGE
501: DSPEIIQGFG VAVKAGLTKA DFDATVGVHP TAAEEFVTMR APTRKFRKDS SEGKASPEAK TAAGV

Arabidopsis Description

EMB2360At3g54660 [Source:UniProtKB/TrEMBL;Acc:Q5FV38]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.