Factsheet for Bra012738.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 2
peroxisome 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90541	Canola	extracellular, nucleus, peroxisome	99.04	99.04
Os05t0156700-01	Rice	plastid	33.65	30.04
Bra033540.1-P	Field mustard	plastid	70.67	26.11
AT4G16155.1	Thale cress	plastid	70.19	25.75
VIT_05s0077g01210.t01	Wine grape	plastid	66.83	24.34
KRH02332	Soybean	endoplasmic reticulum, nucleus	66.35	24.21
KRH11978	Soybean	endoplasmic reticulum, nucleus	64.42	23.72
Solyc01g100360.2.1	Tomato	plastid	64.42	23.51
PGSC0003DMT400007182	Potato	extracellular	64.42	23.51
Bra001645.1-P	Field mustard	plastid	69.71	23.46
VIT_14s0060g01410.t01	Wine grape	cytosol	26.92	23.14
KRH37006	Soybean	cytosol	37.5	23.01
PGSC0003DMT400069799	Potato	mitochondrion, plastid	62.5	22.81
EES19070	Sorghum	plastid	61.54	22.78
Solyc05g053100.2.1	Tomato	nucleus	62.5	22.77
Os01t0337900-01	Rice	plastid	61.06	22.64
KXG32441	Sorghum	plastid	60.58	22.46
VIT_14s0060g01330.t01	Wine grape	plastid	63.46	22.45
KRH50756	Soybean	endoplasmic reticulum, nucleus	67.31	22.26
GSMUA_Achr3P12660_001	Banana	plastid	60.58	22.22
TraesCS1A01G099500.2	Wheat	plastid	60.58	22.18
Zm00001d009779_P002	Maize	plastid	61.54	21.88
HORVU1Hr1G023060.8	Barley	plastid	61.06	21.78
TraesCS1B01G124900.1	Wheat	plastid	61.54	21.73
TraesCS1D01G107400.1	Wheat	plastid	61.06	21.56
PGSC0003DMT400069988	Potato	cytosol	16.83	20.71
Zm00001d009212_P004	Maize	extracellular	60.58	20.52
GSMUA_Achr1P18490_001	Banana	plastid	24.04	17.61
Bra018700.1-P	Field mustard	mitochondrion	31.25	12.82
Bra022204.1-P	Field mustard	mitochondrion	30.29	12.5
Bra015006.1-P	Field mustard	cytosol	25.96	11.11
Bra001931.1-P	Field mustard	cytosol	25.48	10.95
Bra007087.1-P	Field mustard	plastid	29.33	10.83
Bra014801.1-P	Field mustard	plastid	29.81	10.08
CDX93023	Canola	cytosol, mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:Bra012738.1	EnsemblPlants:Bra012738.1-P	EnsemblPlantsGene:Bra012738	Gene3D:3.50.50.60	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
InterPro:IPR036188	PANTHER:PTHR22912	PANTHER:PTHR22912:SF196	PFAM:PF07992	PRINTS:PR00368	SUPFAM:SSF51905
UniParc:UPI00025408A3	UniProt:M4D8C8	MapMan:35.1	:	:	:

Description

AT4G16155 (E=3e-034) | dihydrolipoyl dehydrogenase

Coordinates

chrA03:-:22513082..22514446

Molecular Weight (calculated)

22614.8 Da

IEP (calculated)

8.076

GRAVY (calculated)

0.129

Length

208 amino acids

Sequence
(BLAST)

001: MKALGVDILT GFGSVLGPQK VKYGKDNIIT AKDIIIATGS VPFERLSSQV THALKLGSVP DRIAIIGSGY IGLQFSECLH GSWKRQQSQN LSKCQHQVPL
101: IVILSTFDAK TKEPKDTLEV DAALIATGRA PFTNGLGLEN INVATQIGFI PVDERMRVID ENGKLVPHLY CVGDANGLMR LVPKEFLEFI SLDSMQLILS
201: MKLPTPSL

Best Arabidopsis Sequence Match ( AT4G16155.1 )
(BLAST)

001: MQSVLSLSFS QASLPLANRT LCSSNAAPST PRNLRFCGLR REAFCFSPSK QLTSCRFHIQ SRRIEVSAAA SSSAGNGAPS KSFDYDLIII GAGVGGHGAA
101: LHAVEKGLKT AIIEGDVVGG TCVNRGCVPS KALLAVSGRM RELQNEHHMK AFGLQVSAAG YDRQGVADHA SNLATKIRNN LTNSMKALGV DILTGFGAVL
201: GPQKVKYGDN IITGKDIIIA TGSVPFVPKG IEVDGKTVIT SDHALKLESV PDWIAIVGSG YIGLEFSDVY TALGSEVTFI EALDQLMPGF DPEISKLAQR
301: VLINTRKIDY HTGVFASKIT PAKDGKPVLI ELIDAKTKEP KDTLEVDAAL IATGRAPFTN GLGLENINVT TQRGFIPVDE RMRVIDGNGK LVPHLYCIGD
401: ANGKLMLAHA ASAQGISVVE QVTGRDHVLN HLSIPAACFT HPEISMVGLT EPQAREKAEK EGFKVSIAKT SFKANTKALA ENEGEGLAKM IYRPDNGEIL
501: GVHIFGLHAA DLIHEASNAI ALGTRIQDIK LAVHAHPTLS EVVDELFKAA KVDSPASVTA QSVKVTV

Arabidopsis Description

LPD2Dihydrolipoyl dehydrogenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4JLP5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.