Factsheet for HORVU1Hr1G023060.8

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G107400.1	Wheat	plastid	97.43	96.43
TraesCS1B01G124900.1	Wheat	plastid	96.91	95.93
TraesCS1A01G099500.2	Wheat	plastid	92.8	95.25
Os05t0156700-01	Rice	plastid	36.02	90.13
EES19070	Sorghum	plastid	83.88	87.01
Zm00001d009779_P002	Maize	plastid	86.28	85.98
CDY32221	Canola	plastid	73.76	78.32
VIT_05s0077g01210.t01	Wine grape	plastid	76.33	77.93
CDY34436	Canola	plastid	73.24	77.92
Bra033540.1-P	Field mustard	plastid	74.79	77.44
PGSC0003DMT400069988	Potato	cytosol	22.3	76.92
AT4G16155.1	Thale cress	plastid	74.44	76.54
GSMUA_Achr3P12660_001	Banana	plastid	74.44	76.54
KRH02332	Soybean	endoplasmic reticulum, nucleus	74.1	75.79
KRH11978	Soybean	endoplasmic reticulum, nucleus	73.07	75.4
Solyc05g053100.2.1	Tomato	nucleus	72.38	73.91
PGSC0003DMT400069799	Potato	mitochondrion, plastid	72.21	73.86
KRH37006	Soybean	cytosol	42.02	72.27
CDX75895	Canola	plastid	75.47	71.31
CDX82387	Canola	plastid	75.47	71.2
Bra001645.1-P	Field mustard	plastid	75.3	71.04
AT3G16950.2	Thale cress	plastid	75.13	70.31
KRH50756	Soybean	endoplasmic reticulum, nucleus	75.13	69.63
GSMUA_Achr1P18490_001	Banana	plastid	32.25	66.2
Bra012738.1-P	Field mustard	peroxisome	21.78	61.06
CDX90541	Canola	extracellular, nucleus, peroxisome	21.61	60.58
CDY09711	Canola	plasma membrane	39.28	60.42
HORVU1Hr1G013740.1	Barley	cytosol, mitochondrion	29.33	33.73
HORVU1Hr1G023630.1	Barley	cytosol, mitochondrion, plastid	29.33	31.38
HORVU4Hr1G073930.1	Barley	mitochondrion, plastid	27.27	26.95
HORVU6Hr1G089780.1	Barley	cytosol	13.21	25.08
CDX93023	Canola	cytosol, mitochondrion	2.06	17.65
HORVU0Hr1G017540.7	Barley	peroxisome	7.89	14.15

Protein Annotations

KEGG:00010+1.8.1.4	KEGG:00020+1.8.1.4	KEGG:00260+1.8.1.4	KEGG:00280+1.8.1.4	KEGG:00620+1.8.1.4	KEGG:00640+1.8.1.4
Gene3D:3.30.390.30	Gene3D:3.50.50.60	MapMan:5.1.2.2.3	UniProt:A0A287EWY0	ncoils:Coil	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004148
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0016491	GO:GO:0016668	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0050660	GO:GO:0055114	EnsemblPlantsGene:HORVU1Hr1G023060	EnsemblPlants:HORVU1Hr1G023060.8	InterPro:IPR016156
InterPro:IPR036188	InterPro:Lipoamide_DH	PFAM:PF02852	PFAM:PF07992	PIRSF:PIRSF000350	PRINTS:PR00368
PRINTS:PR00411	ScanProsite:PS00076	PANTHER:PTHR22912	PANTHER:PTHR22912:SF196	InterPro:Pyr_OxRdtase_I_AS	InterPro:Pyr_nuc-diS_OxRdtase
InterPro:Pyr_nucl-diS_OxRdtase_dimer	SUPFAM:SSF51905	SUPFAM:SSF55424	TIGRFAMs:TIGR01350	UniParc:UPI000B46D5C3	SEG:seg

Description

Dihydrolipoyl dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A287EWY0]

Coordinates

chrchr1H:+:100490215..100496489

Molecular Weight (calculated)

61368.7 Da

IEP (calculated)

6.890

GRAVY (calculated)

0.019

Length

583 amino acids

Sequence
(BLAST)

001: RLAMHAVSIS ASASAIASGG ARSKAAAGRR AGEIRFCGIP GDALACDSLR ASHAAAATRR AVVRAAASAN GATGSSGGFD YDLVIIGAGV GGHGAALHAV
101: EEGLKTAIIE GDVVGGTCVN RGCVPSKALL AVSGRMRELH DEHHMKSLGL QVSSTGYDRQ AVADHANNLA SKIRSNLTNS MKAMGVDILT GFGKIVGKQK
201: VRYGKVGFPE KEITAKNIII ATGSVPFVPK GIEIDGKTVF TSDHALKLES VPDWIAIVGS GYIGLEFSDV YTALGSEVTF VEALDQLMPG FDPEIAKLAQ
301: RVLINTRKID YHTGVFASKI TPAKDGKPVL IELIDAKTKE HKETLEVDAA LIATGRAPFT SGLGLENINV VTQRGFIPVD ERMQVTDADG NVVPNLFCIG
401: DANGKLMLAH AASAQGISVV EQISGRDHIL NHLSIPAACF THPEISMVGL TEPQAREKAD NEGFEVSVVK TSFKANTKAL AENEGDGIAK MIYRPDTGEI
501: LGVHILGLHA ADLIHEASNA IALGTRLQEL KLAVHAHPTL SEVLDELFKA AKPKDGQERE QNHPPQPLLK ALSFITSLLS SLQ

Best Arabidopsis Sequence Match ( AT3G16950.1 )
(BLAST)

001: MQSAMALSFS QTSFTRPNHV LGSSGSVFST PRSLRFCGLR REAFGFSTSN QLAIRSNRIQ FLSRKSFQVS ASASSNGNGA PPKSFDYDLI IIGAGVGGHG
101: AALHAVEKGL KTAIIEGDVV GGTCVNRGCV PSKALLAVSG RMRELQNEHH MKSFGLQVSA AGYDRQGVAD HANNLATKIR NNLTNSMKAI GVDILTGFGS
201: VLGPQKVKYG KDNIITAKDI IIATGSVPFV PKGIEVDGKT VITSDHALKL ESVPEWIAIV GSGYIGLEFS DVYTALGSEV TFIEALDQLM PGFDPEISKL
301: AQRVLINPRK IDYHTGVFAS KITPARDGKP VLIELIDAKT KEPKDTLEVD AALIATGRAP FTNGLGLENV NVVTQRGFIP VDERMRVIDG KGTLVPNLYC
401: IGDANGKLML AHAASAQGIS VVEQVSGRDH VLNHLSIPAA CFTHPEISMV GLTEPQAKEK GEKEGFKVSV VKTSFKANTK ALAENEGEGI AKMIYRPDNG
501: EILGVHIFGL HAADLIHEAS NAIALGTRIQ DIKLAVHAHP TLSEVLDELF KAAKVESHAT TRTVSEKVVV

Arabidopsis Description

LPD1Dihydrolipoyl dehydrogenase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A8MS68]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.