CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0156700-01	Rice	plastid	59.0	85.84
PGSC0003DMT400069988	Potato	cytosol	42.77	85.8
CDY09711	Canola	plasma membrane	59.0	52.77
KRH11978	Soybean	endoplasmic reticulum, nucleus	83.78	50.27
KRH02332	Soybean	endoplasmic reticulum, nucleus	81.42	48.42
VIT_05s0077g01210.t01	Wine grape	plastid	80.24	47.64
CDY32221	Canola	plastid	76.11	46.99
CDY34436	Canola	plastid	75.81	46.9
PGSC0003DMT400069799	Potato	mitochondrion, plastid	77.29	45.96
Bra033540.1-P	Field mustard	plastid	76.11	45.83
KXG32441	Sorghum	plastid	75.22	45.45
EES19070	Sorghum	plastid	75.22	45.37
Solyc05g053100.2.1	Tomato	nucleus	76.4	45.36
AT4G16155.1	Thale cress	plastid	75.81	45.33
Os01t0337900-01	Rice	plastid	73.75	44.56
KRH50756	Soybean	endoplasmic reticulum, nucleus	80.83	43.56
Zm00001d009779_P002	Maize	plastid	74.63	43.25
GSMUA_Achr3P12660_001	Banana	plastid	72.27	43.21
TraesCS1A01G099500.2	Wheat	plastid	72.27	43.13
CDX75895	Canola	plastid	76.99	42.3
Bra001645.1-P	Field mustard	plastid	76.99	42.23
CDX82387	Canola	plastid	76.99	42.23
HORVU1Hr1G023060.8	Barley	plastid	72.27	42.02
TraesCS1B01G124900.1	Wheat	plastid	72.27	41.6
TraesCS1D01G107400.1	Wheat	plastid	72.27	41.6
AT3G16950.2	Thale cress	plastid	76.11	41.41
Zm00001d009212_P004	Maize	extracellular	74.63	41.21
CDX90541	Canola	extracellular, nucleus, peroxisome	23.01	37.5
Bra012738.1-P	Field mustard	peroxisome	23.01	37.5
KRH71332	Soybean	cytosol	7.96	21.77
KRH02419	Soybean	mitochondrion	28.61	19.4
KRH50629	Soybean	mitochondrion	28.32	19.2
KRH08536	Soybean	cytosol	20.94	14.17
KRH70193	Soybean	cytosol, nucleus	20.65	13.97
KRH32102	Soybean	plastid	22.12	13.76
KRH71329	Soybean	plastid	21.53	13.39
GSMUA_Achr1P18490_001	Banana	plastid	1.47	1.76
CDX93023	Canola	cytosol, mitochondrion	0.29	1.47

Protein Annotations

Gene3D:3.30.390.30	Gene3D:3.50.50.60	MapMan:35.1	UniProt:A0A0R0I3F1	EMBL:ACUP02005407	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	EnsemblPlantsGene:GLYMA_09G038000	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0019725	GO:GO:0045454	GO:GO:0050660	GO:GO:0055114	InterPro:IPR016156
InterPro:IPR036188	EnsemblPlants:KRH37006	ProteinID:KRH37006	ProteinID:KRH37006.1	PFAM:PF02852	PFAM:PF07992
PRINTS:PR00411	PANTHER:PTHR22912	PANTHER:PTHR22912:SF196	InterPro:Pyr_nucl-diS_OxRdtase_dimer	SUPFAM:SSF51905	SUPFAM:SSF55424
UniParc:UPI0006EDB00D	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:3179040..3183440

Molecular Weight (calculated)

37024.6 Da

IEP (calculated)

6.651

GRAVY (calculated)

-0.119

Length

339 amino acids

Sequence
(BLAST)

001: PKEFSVQLER MDKKVTFIEA LDQLMPGFDP EISKLAQRVL INPRNIDYHT GVFASKITPA RDGKPVTIEL IDAKTKEQKD SLEVDAALIA TGRAPFTQGL
101: GLENIDVVTQ RGFVPVDERM RVLDANGNLV PHLYCIGDTN GKMMLAHAAS AQGISVVEQV TGRDHVLNHL SIPAACFTHP EISMVGLTEP QAREKAEKEG
201: FEVSVAKTSF KANTKALAEN EGEGLAKLIY RPDTGEILGV HIFGLHAADL IHEASNAIAL GSHIQDIKFA VHAHPTLSEV LDELFKSAKV KYPLFTSRLA
301: RTNTQIVSYS RCFNTCSPIQ LLKQVKAQAS EPVKEAVAV

Best Arabidopsis Sequence Match ( AT4G16155.1 )
(BLAST)

001: MQSVLSLSFS QASLPLANRT LCSSNAAPST PRNLRFCGLR REAFCFSPSK QLTSCRFHIQ SRRIEVSAAA SSSAGNGAPS KSFDYDLIII GAGVGGHGAA
101: LHAVEKGLKT AIIEGDVVGG TCVNRGCVPS KALLAVSGRM RELQNEHHMK AFGLQVSAAG YDRQGVADHA SNLATKIRNN LTNSMKALGV DILTGFGAVL
201: GPQKVKYGDN IITGKDIIIA TGSVPFVPKG IEVDGKTVIT SDHALKLESV PDWIAIVGSG YIGLEFSDVY TALGSEVTFI EALDQLMPGF DPEISKLAQR
301: VLINTRKIDY HTGVFASKIT PAKDGKPVLI ELIDAKTKEP KDTLEVDAAL IATGRAPFTN GLGLENINVT TQRGFIPVDE RMRVIDGNGK LVPHLYCIGD
401: ANGKLMLAHA ASAQGISVVE QVTGRDHVLN HLSIPAACFT HPEISMVGLT EPQAREKAEK EGFKVSIAKT SFKANTKALA ENEGEGLAKM IYRPDNGEIL
501: GVHIFGLHAA DLIHEASNAI ALGTRIQDIK LAVHAHPTLS EVVDELFKAA KVDSPASVTA QSVKVTV

Arabidopsis Description

LPD2Dihydrolipoyl dehydrogenase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4JLP5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.