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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, nucleus

Predictor Summary:
  • cytosol 5
  • plastid 2
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus
Any Predictor:cytosol, mitochondrion, peroxisome, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol, plastid
PProwler:mitochondrion
PTS1:peroxisome
WoLF PSORT:cytosol
YLoc:cytosol
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH08536 Soybean cytosol 96.61 96.61
VIT_05s0051g00870.t01 Wine grape cytosol 82.83 83.67
PGSC0003DMT400076297 Potato cytosol 61.68 80.47
Solyc09g091840.2.1 Tomato extracellular 71.86 79.3
AT3G24170.1 Thale cress cytosol 78.44 78.76
CDX85155 Canola cytosol 76.05 78.72
Bra001931.1-P Field mustard cytosol 75.85 78.51
CDX92998 Canola cytosol 75.85 78.51
CDX77463 Canola cytosol 75.85 78.19
Bra015006.1-P Field mustard cytosol 75.85 78.19
GSMUA_Achr1P10930_001 Banana cytosol 75.85 77.87
HORVU6Hr1G089780.1 Barley cytosol 47.7 77.85
GSMUA_AchrUn_... Banana cytosol 55.69 77.72
KXG31334 Sorghum cytosol 75.45 76.36
Os02t0813500-01 Rice cytosol, plasma membrane 74.05 74.8
CDX94838 Canola cytosol 78.44 74.29
GSMUA_AchrUn_... Banana cytosol 13.77 74.19
TraesCS6D01G368800.1 Wheat cytosol 72.46 73.19
TraesCS6B01G423100.1 Wheat cytosol 71.86 72.43
TraesCS6A01G383800.1 Wheat cytosol 72.26 71.97
Zm00001d018454_P004 Maize cytosol 74.25 70.32
TraesCS6B01G423000.1 Wheat cytosol 64.87 64.74
TraesCS2D01G236300.1 Wheat cytosol 13.37 49.26
KRH71329 Soybean plastid 52.1 47.89
KRH32102 Soybean plastid 52.1 47.89
KRH71332 Soybean cytosol 10.78 43.55
TraesCS6D01G201200.1 Wheat cytosol 15.57 41.27
HORVU0Hr1G017540.7 Barley peroxisome 19.16 29.54
KRH50629 Soybean mitochondrion 27.35 27.4
KRH02419 Soybean mitochondrion 27.35 27.4
KRH11978 Soybean endoplasmic reticulum, nucleus 27.15 24.07
KRH02332 Soybean endoplasmic reticulum, nucleus 27.35 24.04
KRH50756 Soybean endoplasmic reticulum, nucleus 27.35 21.78
KRH37006 Soybean cytosol 13.97 20.65
Protein Annotations
KEGG:00480+1.8.1.7MapMan:10.4.1.4EntrezGene:100810846Gene3D:3.30.390.30Gene3D:3.50.50.60EMBL:ACUP02000754
InterPro:FAD/NAD-bd_sfInterPro:FAD/NAD-binding_domInterPro:FAD/NAD-linked_Rdtase_dimer_sfEnsemblPlantsGene:GLYMA_02G074200GO:GO:0000166GO:GO:0000305
GO:GO:0003674GO:GO:0003824GO:GO:0004362GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006091GO:GO:0006749GO:GO:0006950GO:GO:0008150
GO:GO:0008152GO:GO:0009055GO:GO:0009987GO:GO:0016491GO:GO:0016668GO:GO:0019725
GO:GO:0022900GO:GO:0045454GO:GO:0050660GO:GO:0050661GO:GO:0055114GO:GO:0098869
InterPro:Glut-diS_reductUniProt:I1JD78InterPro:IPR016156InterPro:IPR036188EnsemblPlants:KRH70193ProteinID:KRH70193
ProteinID:KRH70193.1ProteinID:KRH70194.1PFAM:PF02852PFAM:PF07992PIRSF:PIRSF000350PRINTS:PR00368
PRINTS:PR00411ScanProsite:PS00076PANTHER:PTHR43256PANTHER:PTHR43256:SF6MetaCyc:PWY-4081InterPro:Pyr_OxRdtase_I_AS
InterPro:Pyr_nuc-diS_OxRdtaseInterPro:Pyr_nucl-diS_OxRdtase_dimerSUPFAM:SSF51905SUPFAM:SSF55424TIGRFAMs:TIGR01424UniParc:UPI0001EF071A
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr2:-:6473402..6488550
Molecular Weight (calculated)
54004.0 Da
IEP (calculated)
5.601
GRAVY (calculated)
-0.079
Length
501 amino acids
Sequence
(BLAST)
001: MARKMLIDGE AEIAQGGGEE VSNFDFDLFI IGAGSGGVRA ARFSSNFGAK VGICELPFHP ISSETIGGVG GTCVIRGCVP KKILVYGASF GGDLQDARNY
101: GWELSEKVDF NWKRLLQKKT DEINRLNGLY KRMLSNWGVK LFEGEGKIVG PNEVEVTQLD GTKLSYSAKH ILIATGGRAQ RPNIPGQELG ITSDEALSLE
201: DLPKRAVVLG GGYIAVEFAS IWRGMGSTVD LVFRKELPLR GFDDEMRAVV ARNLEGRGIN LHPRTNLTQL IKTEDGIKVI TDHGEELIAD VVLFATGRAP
301: NSKRLNLEAV GVELDNTGAI KVDEYSCTSI PSIWAVGDVT NRMNLTPVAL MEASYFAKTV FGGQKIKPDY NNIPYAVFSI PPLSVVGLSE EQAIEQTNGD
401: LLVFTSIFNP MKNTISGRQE KTVMKLVVDA ETDKVLGASM CGPDAPEIIQ GIAIALQCGA TKAQFDSTVG IHPSAAEEFV TMRSVTRRVA GTGSAKPKTN
501: L
Best Arabidopsis Sequence Match ( AT3G24170.3 )
(BLAST)
001: MARKMLVDGE IDKVAADEAN ATHYDFDLFV IGAGSGGVRA ARFSANHGAK VGICELPFHP ISSEEIGGVG GTCVIRGCVP KKILVYGATY GGELEDAKNY
101: GWEINEKVDF TWKKLLQKKT DEILRLNNIY KRLLANAAVK LYEGEGRVVG PNEVEVRQID GTKISYTAKH ILIATGSRAQ KPNIPGHELA ITSDEALSLE
201: EFPKRAIVLG GGYIAVEFAS IWRGMGATVD LFFRKELPLR GFDDEMRALV ARNLEGRGVN LHPQTSLTQL TKTDQGIKVI SSHGEEFVAD VVLFATGRSP
301: NTKRLNLEAV GVELDQAGAV KVDEYSRTNI PSIWAVGDAT NRINLTPVAL MEATCFANTA FGGKPTKAEY SNVACAVFCI PPLAVVGLSE EEAVEQATGD
401: ILVFTSGFNP MKNTISGRQE KTLMKLIVDE KSDKVIGASM CGPDAAEIMQ GIAIALKCGA TKAQFDSTVG IHPSSAEEFV TMRSVTRRIA HKPKPKTNL
Arabidopsis Description
ATGR1Glutathione reductase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P48641]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.