CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001931.1-P	Field mustard	cytosol	100.0	100.0
CDX77463	Canola	cytosol	95.45	95.06
CDX85155	Canola	cytosol	95.04	95.04
AT3G24170.1	Thale cress	cytosol	94.01	91.18
CDX94838	Canola	cytosol	98.97	90.55
PGSC0003DMT400076297	Potato	cytosol	63.64	80.21
VIT_05s0051g00870.t01	Wine grape	cytosol	79.55	77.62
KRH08536	Soybean	cytosol	79.13	76.45
GSMUA_AchrUn_...	Banana	cytosol	14.67	76.34
KRH70193	Soybean	cytosol, nucleus	78.51	75.85
Solyc09g091840.2.1	Tomato	extracellular	71.07	75.77
GSMUA_Achr1P10930_001	Banana	cytosol	72.52	71.93
KXG31334	Sorghum	cytosol	72.93	71.31
GSMUA_AchrUn_...	Banana	cytosol	52.27	70.47
HORVU6Hr1G089780.1	Barley	cytosol	44.42	70.03
Os02t0813500-01	Rice	cytosol, plasma membrane	70.66	68.95
TraesCS6B01G423100.1	Wheat	cytosol	70.25	68.41
TraesCS6D01G368800.1	Wheat	cytosol	70.04	68.35
TraesCS6A01G383800.1	Wheat	cytosol	70.45	67.79
Zm00001d018454_P004	Maize	cytosol	71.9	65.78
TraesCS6B01G423000.1	Wheat	cytosol	63.22	60.96
TraesCS2D01G236300.1	Wheat	cytosol	12.81	45.59
CDX73461	Canola	plastid	50.83	43.85
CDY69892	Canola	plastid	50.83	43.77
CDX94793	Canola	endoplasmic reticulum	14.67	42.52
CDY13217	Canola	plastid	49.79	40.03
CDX76141	Canola	plastid	49.79	39.83
TraesCS6D01G201200.1	Wheat	cytosol	14.46	37.04
CDX93023	Canola	cytosol, mitochondrion	5.17	36.76
HORVU0Hr1G017540.7	Barley	peroxisome	19.63	29.23
CDX93639	Canola	mitochondrion	27.69	26.43
CDY20935	Canola	mitochondrion	27.48	26.23
CDX92121	Canola	mitochondrion	27.07	25.99
CDX95864	Canola	mitochondrion	27.07	25.89
CDX90541	Canola	extracellular, nucleus, peroxisome	10.95	25.48
CDY34436	Canola	plastid	25.0	22.08
CDY32221	Canola	plastid	25.0	22.04
CDX75895	Canola	plastid	25.83	20.26
CDX82387	Canola	plastid	25.83	20.23
CDY09711	Canola	plasma membrane	11.98	15.3

Protein Annotations

KEGG:00480+1.8.1.7	MapMan:10.4.1.4	Gene3D:3.30.390.30	Gene3D:3.50.50.60	GO:A0A078E092	EnsemblPlants:CDX92998
ProteinID:CDX92998	ProteinID:CDX92998.1	ncoils:Coil	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004362	GO:GO:0005488	GO:GO:0005575
GO:GO:0005623	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0016491	GO:GO:0016668	GO:GO:0019725	GO:GO:0045454	GO:GO:0050660	GO:GO:0050661
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00154884001	InterPro:Glut-diS_reduct	InterPro:IPR016156	InterPro:IPR036188	PFAM:PF02852
PFAM:PF07992	PIRSF:PIRSF000350	PRINTS:PR00368	PRINTS:PR00411	ScanProsite:PS00076	PANTHER:PTHR43256
PANTHER:PTHR43256:SF6	MetaCyc:PWY-4081	InterPro:Pyr_OxRdtase_I_AS	InterPro:Pyr_nuc-diS_OxRdtase	InterPro:Pyr_nucl-diS_OxRdtase_dimer	SUPFAM:SSF51905
SUPFAM:SSF55424	TIGRFAMs:TIGR01424	UniParc:UPI00025407B5	:	:	:

Description

BnaA03g37200D

Coordinates

chrLK031874:-:604379..608100

Molecular Weight (calculated)

52394.9 Da

IEP (calculated)

6.421

GRAVY (calculated)

-0.125

Length

484 amino acids

Sequence
(BLAST)

001: MGRKMLADGE LDKAVAAEEA TEAHYDFDLF VIGAGSGGVR AARFSANNGA KVGICELPFH PISSEEIGGV GGTCVIRGCV PKKILVYGAT YGGELEDARN
101: YGWEINENVD FTWKKLLQKK TDEILRLNNI YKRLLANAAV KLYEGEGRIV GPNEVEVRQI DGTKISYTAK HILIATGSRA QKPNIPGHEL AITSDEALSL
201: EEFPKRAVVL GGGYIAVEFA SIWRGMGGTV DLFFRKELPL RGFDDEMRAL VARNLEGRGV NLHPQTSLTQ LTKTDEGIKV ISSHGEEFMA DVVLFATGRN
301: PNTKRLNLEA VGVELDQAGA VKVDEYSRTN IPSIWAVGDA TNRINLTPVA LMEATCFANT VFGGKPTKAD YSNVACAVFC IPPLAVVGLS EEEAVEKATG
401: DILVFTSGFN PMKNTISGRQ EKSLMKLIVD EQTDKGIAIA LKCGATKAQF DSTVGIHPSS AEEFVTMRTV TRRIAYKAKP KTSL

Best Arabidopsis Sequence Match ( AT3G24170.3 )
(BLAST)

001: MARKMLVDGE IDKVAADEAN ATHYDFDLFV IGAGSGGVRA ARFSANHGAK VGICELPFHP ISSEEIGGVG GTCVIRGCVP KKILVYGATY GGELEDAKNY
101: GWEINEKVDF TWKKLLQKKT DEILRLNNIY KRLLANAAVK LYEGEGRVVG PNEVEVRQID GTKISYTAKH ILIATGSRAQ KPNIPGHELA ITSDEALSLE
201: EFPKRAIVLG GGYIAVEFAS IWRGMGATVD LFFRKELPLR GFDDEMRALV ARNLEGRGVN LHPQTSLTQL TKTDQGIKVI SSHGEEFVAD VVLFATGRSP
301: NTKRLNLEAV GVELDQAGAV KVDEYSRTNI PSIWAVGDAT NRINLTPVAL MEATCFANTA FGGKPTKAEY SNVACAVFCI PPLAVVGLSE EEAVEQATGD
401: ILVFTSGFNP MKNTISGRQE KTLMKLIVDE KSDKVIGASM CGPDAAEIMQ GIAIALKCGA TKAQFDSTVG IHPSSAEEFV TMRSVTRRIA HKPKPKTNL

Arabidopsis Description

ATGR1Glutathione reductase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P48641]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.