CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93639	Canola	mitochondrion	98.82	98.82
Bra018700.1-P	Field mustard	mitochondrion	98.62	98.62
AT1G48030.3	Thale cress	mitochondrion	94.48	94.48
CDX92121	Canola	mitochondrion	92.5	93.06
CDX95864	Canola	mitochondrion	92.31	92.49
KRH50629	Soybean	mitochondrion	84.22	85.4
Solyc05g053300.2.1	Tomato	extracellular, mitochondrion, nucleus, plastid, unclear	84.02	85.2
KRH02419	Soybean	mitochondrion	84.02	85.2
PGSC0003DMT400069840	Potato	mitochondrion	83.63	84.8
VIT_05s0020g00380.t01	Wine grape	mitochondrion	83.63	84.46
Solyc12g099100.1.1	Tomato	plastid	83.63	84.13
PGSC0003DMT400011741	Potato	mitochondrion	83.43	83.93
GSMUA_Achr11P...	Banana	mitochondrion	77.12	83.55
GSMUA_Achr2P02040_001	Banana	mitochondrion	76.92	83.33
TraesCS1A01G105600.1	Wheat	mitochondrion	78.7	79.48
TraesCS1D01G109600.1	Wheat	mitochondrion	78.5	79.28
TraesCS1B01G131300.1	Wheat	mitochondrion	78.5	79.28
Zm00001d009163_P001	Maize	mitochondrion	77.71	78.96
EES02889	Sorghum	mitochondrion	78.11	78.57
TraesCS1A01G066400.1	Wheat	mitochondrion	77.91	78.53
TraesCS1B01G084700.1	Wheat	mitochondrion	77.71	78.33
Os01t0328700-01	Rice	mitochondrion	77.71	78.33
Zm00001d040721_P002	Maize	mitochondrion	77.51	78.13
TraesCS1D01G067500.1	Wheat	mitochondrion	77.71	78.02
EES17766	Sorghum	mitochondrion	75.35	76.4
HORVU1Hr1G013740.1	Barley	cytosol, mitochondrion	75.94	75.94
HORVU1Hr1G023630.1	Barley	cytosol, mitochondrion, plastid	78.11	72.66
CDY32221	Canola	plastid	33.73	31.15
CDY34436	Canola	plastid	33.33	30.84
CDX90541	Canola	extracellular, nucleus, peroxisome	12.62	30.77
CDX75895	Canola	plastid	33.73	27.71
CDX82387	Canola	plastid	33.73	27.67
CDX77463	Canola	cytosol	26.43	27.57
CDX92998	Canola	cytosol	26.23	27.48
CDX85155	Canola	cytosol	26.23	27.48
CDX94838	Canola	cytosol	27.02	25.9
CDX94793	Canola	endoplasmic reticulum	8.48	25.75
CDY09711	Canola	plasma membrane	17.95	24.01
CDX73461	Canola	plastid	26.04	23.53
CDY69892	Canola	plastid	26.04	23.49
CDY13217	Canola	plastid	25.64	21.59
CDX76141	Canola	plastid	25.05	20.99
CDX93023	Canola	cytosol, mitochondrion	2.76	20.59

Protein Annotations

KEGG:00010+1.8.1.4	KEGG:00020+1.8.1.4	KEGG:00260+1.8.1.4	KEGG:00280+1.8.1.4	KEGG:00620+1.8.1.4	KEGG:00640+1.8.1.4
MapMan:1.3.4.3	MapMan:2.2.1.3	MapMan:2.3.4.3	Gene3D:3.30.390.30	Gene3D:3.50.50.60	MapMan:4.2.7.2.3
GO:A0A078G360	UniProt:A0A078G360	EnsemblPlants:CDY20935	ProteinID:CDY20935	ProteinID:CDY20935.1	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004148
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0016491	GO:GO:0016668	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0050660	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00013308001	InterPro:IPR016156	InterPro:IPR036188
InterPro:Lipoamide_DH	PFAM:PF02852	PFAM:PF07992	PIRSF:PIRSF000350	PRINTS:PR00368	PRINTS:PR00411
ScanProsite:PS00076	PANTHER:PTHR22912	PANTHER:PTHR22912:SF151	MetaCyc:PWY-5046	MetaCyc:PWY-5084	InterPro:Pyr_OxRdtase_I_AS
InterPro:Pyr_nuc-diS_OxRdtase	InterPro:Pyr_nucl-diS_OxRdtase_dimer	SUPFAM:SSF51905	SUPFAM:SSF55424	TIGRFAMs:TIGR01350	UniParc:UPI0004EEAE14
SEG:seg	:	:	:	:	:

Description

BnaC06g01550DDihydrolipoyl dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A078G360]

Coordinates

chrLK032114:-:577634..579860

Molecular Weight (calculated)

53928.0 Da

IEP (calculated)

7.296

GRAVY (calculated)

-0.042

Length

507 amino acids

Sequence
(BLAST)

001: MAMANLARRK AYFLTRNVTS SHTDALKFSF SLSRGFASSG SDENDVVVIG GGPGGYVAAI KAAQLGLKTT CIEKRGALGG TCLNVGCIPS KALLHSSHMY
101: HEAKHAFAHH GIKLASVEVD LPAMLAQKDN AVKNLTRGIE GLFKKNKVTY VKGYGKFLSP NEVSVETIDG GNTVVKGKHI IVATGSDVKS LPGITIDEKK
201: IVSSTGALSL SEVPKKLIVI GAGYIGLEMG SVWGRLGSEV TVVEFAADIV PSMDGEIRKQ FQRSLEKQKM KFMLKTKVVS VDASGDGVNL TVEPSEGGDQ
301: TTLEADVVLV SAGRTPFTSG LDLEKIGVET DKGGRILVNE RFLTNVSGVY AIGDVIPGPM LAHKAEEDGV ACVEFIAGKH GHVDYDKVPG VVYTHPEVAS
401: VGKTEEQLKK DGVSYRVGKF PFMANSRAKA IDNAEGLVKI LADKETDKIL GVHIMSPNAG ELIHEAVLAI NYDASSEDIA RVCHAHPTMS EALKEAAMAT
501: YDKPIHI

Best Arabidopsis Sequence Match ( AT1G48030.4 )
(BLAST)

001: MAMASLARRK AYFLTRNLSN SPTDALRFSF SLSRGFASSG SDENDVVIIG GGPGGYVAAI KASQLGLKTT CIEKRGALGG TCLNVGCIPS KALLHSSHMY
101: HEAKHSFANH GIKVSSVEVD LPAMLAQKDN AVKNLTRGIE GLFKKNKVTY VKGYGKFISP NEVSVETIDG GNTIVKGKHI IVATGSDVKS LPGITIDEKK
201: IVSSTGALSL SEVPKKLIVI GAGYIGLEMG SVWGRLGSEV TVVEFAGDIV PSMDGEIRKQ FQRSLEKQKM KFMLKTKVVS VDSSSDGVKL TVEPAEGGEQ
301: SILEADVVLV SAGRTPFTSG LDLEKIGVET DKAGRILVND RFLSNVPGVY AIGDVIPGPM LAHKAEEDGV ACVEFIAGKH GHVDYDKVPG VVYTHPEVAS
401: VGKTEEQLKK EGVSYRVGKF PFMANSRAKA IDNAEGLVKI LADKETDKIL GVHIMAPNAG ELIHEAVLAI NYDASSEDIA RVCHAHPTMS EALKEAAMAT
501: YDKPIHI

Arabidopsis Description

LPD1Dihydrolipoyl dehydrogenase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M5K3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.