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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 7
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
mitochondrion: 22607058
mitochondrion: 27297264
plasma membrane: 27341663
mitochondrion: 29575040
msms PMID: 22607058 doi
D Dahal, BP Mooney, KJ Newton
Division of Biological Sciences, University of Missouri, Columbia, MO 65211, USA.
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID: 29575040 doi
WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song
Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d033980_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G17240.1 Zm00001d033980_P001 AT4G14640.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES02889 Sorghum mitochondrion 98.0 97.02
Zm00001d040721_P002 Maize mitochondrion 97.8 97.02
Os01t0328700-01 Rice mitochondrion 93.39 92.64
TraesCS1B01G084700.1 Wheat mitochondrion 91.38 90.66
TraesCS1A01G066400.1 Wheat mitochondrion 91.38 90.66
TraesCS1D01G067500.1 Wheat mitochondrion 91.58 90.5
HORVU1Hr1G013740.1 Barley cytosol, mitochondrion 88.38 86.98
GSMUA_Achr11P... Banana mitochondrion 79.36 84.62
GSMUA_Achr2P02040_001 Banana mitochondrion 78.16 83.33
Solyc05g053300.2.1 Tomato extracellular, mitochondrion, nucleus, plastid, unclear 81.96 81.8
PGSC0003DMT400069840 Potato mitochondrion 81.96 81.8
VIT_05s0020g00380.t01 Wine grape mitochondrion 81.36 80.88
KRH50629 Soybean mitochondrion 80.36 80.2
PGSC0003DMT400011741 Potato mitochondrion 80.96 80.16
KRH02419 Soybean mitochondrion 79.96 79.8
Solyc12g099100.1.1 Tomato plastid 80.56 79.76
AT1G48030.3 Thale cress mitochondrion 79.56 78.3
CDX93639 Canola mitochondrion 79.36 78.11
Bra018700.1-P Field mustard mitochondrion 79.16 77.91
CDY20935 Canola mitochondrion 78.96 77.71
Bra022204.1-P Field mustard mitochondrion 78.36 77.58
CDX92121 Canola mitochondrion 78.16 77.38
CDX95864 Canola mitochondrion 78.16 77.08
AT3G17240.1 Thale cress mitochondrion 78.16 76.92
Zm00001d009779_P002 Maize plastid 34.47 29.4
Zm00001d009212_P004 Maize extracellular 33.87 27.52
Zm00001d018454_P004 Maize cytosol 26.05 24.57
Zm00001d027769_P001 Maize plastid 26.05 23.64
Protein Annotations
KEGG:00010+1.8.1.4KEGG:00020+1.8.1.4KEGG:00260+1.8.1.4KEGG:00280+1.8.1.4KEGG:00620+1.8.1.4KEGG:00640+1.8.1.4
MapMan:1.3.4.3EntrezGene:100501719MapMan:2.2.1.3MapMan:2.3.4.3Gene3D:3.30.390.30Gene3D:3.50.50.60
MapMan:4.2.7.2.3ProteinID:AQK91438.1InterPro:FAD/NAD-bd_sfInterPro:FAD/NAD-binding_domInterPro:FAD/NAD-linked_Rdtase_dimer_sfGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004148GO:GO:0005488GO:GO:0005575GO:GO:0005623
GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009055GO:GO:0009987GO:GO:0016491
GO:GO:0016668GO:GO:0019725GO:GO:0022900GO:GO:0045454GO:GO:0050660GO:GO:0055114
InterPro:IPR016156InterPro:IPR036188UniProt:K7US39InterPro:Lipoamide_DHPFAM:PF02852PFAM:PF07992
PIRSF:PIRSF000350PRINTS:PR00368PRINTS:PR00411ScanProsite:PS00076PANTHER:PTHR22912PANTHER:PTHR22912:SF151
InterPro:Pyr_OxRdtase_I_ASInterPro:Pyr_nuc-diS_OxRdtaseInterPro:Pyr_nucl-diS_OxRdtase_dimerSUPFAM:SSF51905SUPFAM:SSF55424TIGRFAMs:TIGR01350
UniParc:UPI00022096D6EnsemblPlantsGene:Zm00001d009163EnsemblPlants:Zm00001d009163_P001EnsemblPlants:Zm00001d009163_T001SEG:seg:
Description
Dihydrolipoyl dehydrogenase
Coordinates
chr8:-:40371057..40374042
Molecular Weight (calculated)
52657.0 Da
IEP (calculated)
7.355
GRAVY (calculated)
0.083
Length
499 amino acids
Sequence
(BLAST)
001: MMLAILARRR AAEAVLRRPQ AALSAWRAYA AAGEESDVVV VGGGPGGYVA AIKAAQLGLK TTCIEKRGTL GGTCLNVGCI PSKALLHSSH MYHEAKSSFA
101: HHGVKFSNLE VDLPAMMAQK DKAVAGLTKG IEGLFKKNKV TYVKGFGKLS SPSEVSVDLI DGGSTVVKGK NIIIATGSDV KSLPGITIDE KKVVSSTGAL
201: CLSEIPKKLV VIGAGYIGLE MGSVWNRLGS EVTVVEFAPD IVPSMDGEVR KQFQRMLEKQ KFKFMLKTKV VGCDTSGDGV KLTLEPAAGG EQNILEADVV
301: LVSAGRTPFT SGIGLETLGV ETDKAGRILV DKRFMTNVKG VYAIGDAIPG PMLAHKAEED GVACVEFIAG KEGHVDYDTV PGVVYTHPEV ASVGKTEEQV
401: TALGIPYRVG KFPLLANSRA KAIDDAEGVV KVIAEKETDK ILGVHIMAPN AGEIIHEAVI ALQYGASSED VARTCHAHPT VSEALKEACL QTFDKAIHI
Best Arabidopsis Sequence Match ( AT1G48030.4 )
(BLAST)
001: MAMASLARRK AYFLTRNLSN SPTDALRFSF SLSRGFASSG SDENDVVIIG GGPGGYVAAI KASQLGLKTT CIEKRGALGG TCLNVGCIPS KALLHSSHMY
101: HEAKHSFANH GIKVSSVEVD LPAMLAQKDN AVKNLTRGIE GLFKKNKVTY VKGYGKFISP NEVSVETIDG GNTIVKGKHI IVATGSDVKS LPGITIDEKK
201: IVSSTGALSL SEVPKKLIVI GAGYIGLEMG SVWGRLGSEV TVVEFAGDIV PSMDGEIRKQ FQRSLEKQKM KFMLKTKVVS VDSSSDGVKL TVEPAEGGEQ
301: SILEADVVLV SAGRTPFTSG LDLEKIGVET DKAGRILVND RFLSNVPGVY AIGDVIPGPM LAHKAEEDGV ACVEFIAGKH GHVDYDKVPG VVYTHPEVAS
401: VGKTEEQLKK EGVSYRVGKF PFMANSRAKA IDNAEGLVKI LADKETDKIL GVHIMAPNAG ELIHEAVLAI NYDASSEDIA RVCHAHPTMS EALKEAAMAT
501: YDKPIHI
Arabidopsis Description
LPD1Dihydrolipoyl dehydrogenase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M5K3]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.