Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 7
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
mitochondrion:
22607058
mitochondrion: 27297264 plasma membrane: 27341663 mitochondrion: 29575040 |
msms PMID:
22607058
doi
Division of Biological Sciences, University of Missouri, Columbia, MO 65211, USA.
msms PMID:
27297264
doi
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID:
29575040
doi
Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Zm00001d033980_P001 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G17240.1 | Zm00001d033980_P001 | AT4G14640.1 | 17360592 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
EES02889 | Sorghum | mitochondrion | 98.0 | 97.02 |
Zm00001d040721_P002 | Maize | mitochondrion | 97.8 | 97.02 |
Os01t0328700-01 | Rice | mitochondrion | 93.39 | 92.64 |
TraesCS1B01G084700.1 | Wheat | mitochondrion | 91.38 | 90.66 |
TraesCS1A01G066400.1 | Wheat | mitochondrion | 91.38 | 90.66 |
TraesCS1D01G067500.1 | Wheat | mitochondrion | 91.58 | 90.5 |
HORVU1Hr1G013740.1 | Barley | cytosol, mitochondrion | 88.38 | 86.98 |
GSMUA_Achr11P... | Banana | mitochondrion | 79.36 | 84.62 |
GSMUA_Achr2P02040_001 | Banana | mitochondrion | 78.16 | 83.33 |
Solyc05g053300.2.1 | Tomato | extracellular, mitochondrion, nucleus, plastid, unclear | 81.96 | 81.8 |
PGSC0003DMT400069840 | Potato | mitochondrion | 81.96 | 81.8 |
VIT_05s0020g00380.t01 | Wine grape | mitochondrion | 81.36 | 80.88 |
KRH50629 | Soybean | mitochondrion | 80.36 | 80.2 |
PGSC0003DMT400011741 | Potato | mitochondrion | 80.96 | 80.16 |
KRH02419 | Soybean | mitochondrion | 79.96 | 79.8 |
Solyc12g099100.1.1 | Tomato | plastid | 80.56 | 79.76 |
AT1G48030.3 | Thale cress | mitochondrion | 79.56 | 78.3 |
CDX93639 | Canola | mitochondrion | 79.36 | 78.11 |
Bra018700.1-P | Field mustard | mitochondrion | 79.16 | 77.91 |
CDY20935 | Canola | mitochondrion | 78.96 | 77.71 |
Bra022204.1-P | Field mustard | mitochondrion | 78.36 | 77.58 |
CDX92121 | Canola | mitochondrion | 78.16 | 77.38 |
CDX95864 | Canola | mitochondrion | 78.16 | 77.08 |
AT3G17240.1 | Thale cress | mitochondrion | 78.16 | 76.92 |
Zm00001d009779_P002 | Maize | plastid | 34.47 | 29.4 |
Zm00001d009212_P004 | Maize | extracellular | 33.87 | 27.52 |
Zm00001d018454_P004 | Maize | cytosol | 26.05 | 24.57 |
Zm00001d027769_P001 | Maize | plastid | 26.05 | 23.64 |
Protein Annotations
KEGG:00010+1.8.1.4 | KEGG:00020+1.8.1.4 | KEGG:00260+1.8.1.4 | KEGG:00280+1.8.1.4 | KEGG:00620+1.8.1.4 | KEGG:00640+1.8.1.4 |
MapMan:1.3.4.3 | EntrezGene:100501719 | MapMan:2.2.1.3 | MapMan:2.3.4.3 | Gene3D:3.30.390.30 | Gene3D:3.50.50.60 |
MapMan:4.2.7.2.3 | ProteinID:AQK91438.1 | InterPro:FAD/NAD-bd_sf | InterPro:FAD/NAD-binding_dom | InterPro:FAD/NAD-linked_Rdtase_dimer_sf | GO:GO:0000166 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004148 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 |
GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0016491 |
GO:GO:0016668 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0050660 | GO:GO:0055114 |
InterPro:IPR016156 | InterPro:IPR036188 | UniProt:K7US39 | InterPro:Lipoamide_DH | PFAM:PF02852 | PFAM:PF07992 |
PIRSF:PIRSF000350 | PRINTS:PR00368 | PRINTS:PR00411 | ScanProsite:PS00076 | PANTHER:PTHR22912 | PANTHER:PTHR22912:SF151 |
InterPro:Pyr_OxRdtase_I_AS | InterPro:Pyr_nuc-diS_OxRdtase | InterPro:Pyr_nucl-diS_OxRdtase_dimer | SUPFAM:SSF51905 | SUPFAM:SSF55424 | TIGRFAMs:TIGR01350 |
UniParc:UPI00022096D6 | EnsemblPlantsGene:Zm00001d009163 | EnsemblPlants:Zm00001d009163_P001 | EnsemblPlants:Zm00001d009163_T001 | SEG:seg | : |
Description
Dihydrolipoyl dehydrogenase
Coordinates
chr8:-:40371057..40374042
Molecular Weight (calculated)
52657.0 Da
IEP (calculated)
7.355
GRAVY (calculated)
0.083
Length
499 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLAILARRR AAEAVLRRPQ AALSAWRAYA AAGEESDVVV VGGGPGGYVA AIKAAQLGLK TTCIEKRGTL GGTCLNVGCI PSKALLHSSH MYHEAKSSFA
101: HHGVKFSNLE VDLPAMMAQK DKAVAGLTKG IEGLFKKNKV TYVKGFGKLS SPSEVSVDLI DGGSTVVKGK NIIIATGSDV KSLPGITIDE KKVVSSTGAL
201: CLSEIPKKLV VIGAGYIGLE MGSVWNRLGS EVTVVEFAPD IVPSMDGEVR KQFQRMLEKQ KFKFMLKTKV VGCDTSGDGV KLTLEPAAGG EQNILEADVV
301: LVSAGRTPFT SGIGLETLGV ETDKAGRILV DKRFMTNVKG VYAIGDAIPG PMLAHKAEED GVACVEFIAG KEGHVDYDTV PGVVYTHPEV ASVGKTEEQV
401: TALGIPYRVG KFPLLANSRA KAIDDAEGVV KVIAEKETDK ILGVHIMAPN AGEIIHEAVI ALQYGASSED VARTCHAHPT VSEALKEACL QTFDKAIHI
101: HHGVKFSNLE VDLPAMMAQK DKAVAGLTKG IEGLFKKNKV TYVKGFGKLS SPSEVSVDLI DGGSTVVKGK NIIIATGSDV KSLPGITIDE KKVVSSTGAL
201: CLSEIPKKLV VIGAGYIGLE MGSVWNRLGS EVTVVEFAPD IVPSMDGEVR KQFQRMLEKQ KFKFMLKTKV VGCDTSGDGV KLTLEPAAGG EQNILEADVV
301: LVSAGRTPFT SGIGLETLGV ETDKAGRILV DKRFMTNVKG VYAIGDAIPG PMLAHKAEED GVACVEFIAG KEGHVDYDTV PGVVYTHPEV ASVGKTEEQV
401: TALGIPYRVG KFPLLANSRA KAIDDAEGVV KVIAEKETDK ILGVHIMAPN AGEIIHEAVI ALQYGASSED VARTCHAHPT VSEALKEACL QTFDKAIHI
001: MAMASLARRK AYFLTRNLSN SPTDALRFSF SLSRGFASSG SDENDVVIIG GGPGGYVAAI KASQLGLKTT CIEKRGALGG TCLNVGCIPS KALLHSSHMY
101: HEAKHSFANH GIKVSSVEVD LPAMLAQKDN AVKNLTRGIE GLFKKNKVTY VKGYGKFISP NEVSVETIDG GNTIVKGKHI IVATGSDVKS LPGITIDEKK
201: IVSSTGALSL SEVPKKLIVI GAGYIGLEMG SVWGRLGSEV TVVEFAGDIV PSMDGEIRKQ FQRSLEKQKM KFMLKTKVVS VDSSSDGVKL TVEPAEGGEQ
301: SILEADVVLV SAGRTPFTSG LDLEKIGVET DKAGRILVND RFLSNVPGVY AIGDVIPGPM LAHKAEEDGV ACVEFIAGKH GHVDYDKVPG VVYTHPEVAS
401: VGKTEEQLKK EGVSYRVGKF PFMANSRAKA IDNAEGLVKI LADKETDKIL GVHIMAPNAG ELIHEAVLAI NYDASSEDIA RVCHAHPTMS EALKEAAMAT
501: YDKPIHI
101: HEAKHSFANH GIKVSSVEVD LPAMLAQKDN AVKNLTRGIE GLFKKNKVTY VKGYGKFISP NEVSVETIDG GNTIVKGKHI IVATGSDVKS LPGITIDEKK
201: IVSSTGALSL SEVPKKLIVI GAGYIGLEMG SVWGRLGSEV TVVEFAGDIV PSMDGEIRKQ FQRSLEKQKM KFMLKTKVVS VDSSSDGVKL TVEPAEGGEQ
301: SILEADVVLV SAGRTPFTSG LDLEKIGVET DKAGRILVND RFLSNVPGVY AIGDVIPGPM LAHKAEEDGV ACVEFIAGKH GHVDYDKVPG VVYTHPEVAS
401: VGKTEEQLKK EGVSYRVGKF PFMANSRAKA IDNAEGLVKI LADKETDKIL GVHIMAPNAG ELIHEAVLAI NYDASSEDIA RVCHAHPTMS EALKEAAMAT
501: YDKPIHI
Arabidopsis Description
LPD1Dihydrolipoyl dehydrogenase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M5K3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.