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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 7
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:mitochondrion
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92121 Canola mitochondrion 95.27 95.83
Bra022204.1-P Field mustard mitochondrion 95.07 95.63
CDX95864 Canola mitochondrion 95.07 95.26
AT1G48030.3 Thale cress mitochondrion 92.7 92.7
Solyc05g053300.2.1 Tomato extracellular, mitochondrion, nucleus, plastid, unclear 84.02 85.2
KRH02419 Soybean mitochondrion 84.02 85.2
KRH50629 Soybean mitochondrion 83.83 85.0
PGSC0003DMT400069840 Potato mitochondrion 83.63 84.8
VIT_05s0020g00380.t01 Wine grape mitochondrion 83.23 84.06
Solyc12g099100.1.1 Tomato plastid 83.04 83.53
PGSC0003DMT400011741 Potato mitochondrion 82.84 83.33
GSMUA_Achr2P02040_001 Banana mitochondrion 76.13 82.48
GSMUA_Achr11P... Banana mitochondrion 75.74 82.05
TraesCS1A01G105600.1 Wheat mitochondrion 79.49 80.28
TraesCS1B01G131300.1 Wheat mitochondrion 79.29 80.08
TraesCS1D01G109600.1 Wheat mitochondrion 79.29 80.08
Zm00001d009163_P001 Maize mitochondrion 76.92 78.16
EES02889 Sorghum mitochondrion 77.51 77.98
Zm00001d040721_P002 Maize mitochondrion 77.12 77.73
TraesCS1B01G084700.1 Wheat mitochondrion 76.92 77.53
TraesCS1A01G066400.1 Wheat mitochondrion 76.73 77.34
TraesCS1D01G067500.1 Wheat mitochondrion 76.92 77.23
Os01t0328700-01 Rice mitochondrion 76.53 77.14
EES17766 Sorghum mitochondrion 75.94 77.0
HORVU1Hr1G013740.1 Barley cytosol, mitochondrion 75.15 75.15
HORVU1Hr1G023630.1 Barley cytosol, mitochondrion, plastid 78.9 73.39
AT4G16155.1 Thale cress plastid 34.12 30.51
AT3G16950.2 Thale cress plastid 34.52 28.09
AT3G24170.1 Thale cress cytosol 27.22 27.66
AT3G54660.1 Thale cress plastid 25.64 23.01
Protein Annotations
KEGG:00010+1.8.1.4KEGG:00020+1.8.1.4KEGG:00260+1.8.1.4KEGG:00280+1.8.1.4KEGG:00620+1.8.1.4KEGG:00640+1.8.1.4
MapMan:1.3.4.3MapMan:2.2.1.3MapMan:2.3.4.3Gene3D:3.30.390.30Gene3D:3.50.50.60MapMan:4.2.7.2.3
EntrezGene:820984EMBL:AB022216ProteinID:AEE75925.1ProteinID:AEE75926.1ProteinID:AEE75927.1EMBL:AF228640
EMBL:AJ223804ArrayExpress:AT3G17240EnsemblPlantsGene:AT3G17240RefSeq:AT3G17240TAIR:AT3G17240RefSeq:AT3G17240-TAIR-G
EnsemblPlants:AT3G17240.1TAIR:AT3G17240.1EMBL:AY087203EMBL:BT024578InterPro:FAD/NAD-bd_sfInterPro:FAD/NAD-binding_dom
InterPro:FAD/NAD-linked_Rdtase_dimer_sfGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004148GO:GO:0005488
GO:GO:0005507GO:GO:0005524GO:GO:0005575GO:GO:0005576GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005739GO:GO:0005747GO:GO:0005759GO:GO:0006091GO:GO:0008150
GO:GO:0008152GO:GO:0008270GO:GO:0009055GO:GO:0009507GO:GO:0009536GO:GO:0009987
GO:GO:0016020GO:GO:0016491GO:GO:0016668GO:GO:0019725GO:GO:0022900GO:GO:0045454
GO:GO:0046686GO:GO:0048046GO:GO:0050660GO:GO:0050897GO:GO:0055114InterPro:IPR016156
InterPro:IPR036188InterPro:Lipoamide_DHRefSeq:NP_566570.3RefSeq:NP_566571.1RefSeq:NP_851005.1PFAM:PF02852
PFAM:PF07992PIRSF:PIRSF000350PO:PO:0000005PO:PO:0000013PO:PO:0000037PO:PO:0000084
PO:PO:0000230PO:PO:0000293PO:PO:0001016PO:PO:0001017PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001170PO:PO:0001185PO:PO:0004507PO:PO:0005417PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007131
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009001PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025195PO:PO:0025281PRINTS:PR00368
PRINTS:PR00411ScanProsite:PS00076PANTHER:PTHR22912PANTHER:PTHR22912:SF151InterPro:Pyr_OxRdtase_I_ASInterPro:Pyr_nuc-diS_OxRdtase
InterPro:Pyr_nucl-diS_OxRdtase_dimerUniProt:Q9M5K2SUPFAM:SSF51905SUPFAM:SSF55424TIGRFAMs:TIGR01350UniParc:UPI00000A31EC
Symbol:mtLPD2SEG:seg::::
Description
LPD2Dihydrolipoyl dehydrogenase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9M5K2]
Coordinates
chr3:-:5889663..5892332
Molecular Weight (calculated)
53989.2 Da
IEP (calculated)
7.037
GRAVY (calculated)
-0.023
Length
507 amino acids
Sequence
(BLAST)
001: MAMASLARRK AYFLTRNISN SPTDAFRFSF SLTRGFASSG SDDNDVVIIG GGPGGYVAAI KAAQLGLKTT CIEKRGALGG TCLNVGCIPS KALLHSSHMY
101: HEAKHVFANH GVKVSSVEVD LPAMLAQKDT AVKNLTRGVE GLFKKNKVNY VKGYGKFLSP SEVSVDTIDG ENVVVKGKHI IVATGSDVKS LPGITIDEKK
201: IVSSTGALSL TEIPKKLIVI GAGYIGLEMG SVWGRLGSEV TVVEFAADIV PAMDGEIRKQ FQRSLEKQKM KFMLKTKVVG VDSSGDGVKL IVEPAEGGEQ
301: TTLEADVVLV SAGRTPFTSG LDLEKIGVET DKGGRILVNE RFSTNVSGVY AIGDVIPGPM LAHKAEEDGV ACVEFIAGKH GHVDYDKVPG VVYTYPEVAS
401: VGKTEEQLKK EGVSYNVGKF PFMANSRAKA IDTAEGMVKI LADKETDKIL GVHIMSPNAG ELIHEAVLAI NYDASSEDIA RVCHAHPTMS EAIKEAAMAT
501: YDKPIHM
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.