CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73461	Canola	plastid	85.29	10.34
CDY69892	Canola	plastid	85.29	10.32
CDY13217	Canola	plastid	80.88	9.14
CDX76141	Canola	plastid	79.41	8.93
CDX85155	Canola	cytosol	36.76	5.17
CDX92998	Canola	cytosol	36.76	5.17
CDX77463	Canola	cytosol	36.76	5.14
CDX94838	Canola	cytosol	36.76	4.73
GSMUA_Achr1P18490_001	Banana	plastid	17.65	4.23
CDX92121	Canola	mitochondrion	20.59	2.78
CDX95864	Canola	mitochondrion	20.59	2.77
CDY20935	Canola	mitochondrion	20.59	2.76
CDX93639	Canola	mitochondrion	20.59	2.76
CDY34436	Canola	plastid	20.59	2.55
KXG32441	Sorghum	plastid	20.59	2.5
GSMUA_Achr3P12660_001	Banana	plastid	20.59	2.47
KRH02332	Soybean	endoplasmic reticulum, nucleus	20.59	2.46
PGSC0003DMT400007182	Potato	extracellular	20.59	2.46
Solyc01g100360.2.1	Tomato	plastid	20.59	2.46
Zm00001d009779_P002	Maize	plastid	20.59	2.39
CDY32221	Canola	plastid	19.12	2.37
Os01t0337900-01	Rice	plastid	19.12	2.32
EES19070	Sorghum	plastid	19.12	2.31
KRH11978	Soybean	endoplasmic reticulum, nucleus	19.12	2.3
AT4G16155.1	Thale cress	plastid	19.12	2.29
TraesCS1A01G099500.2	Wheat	plastid	19.12	2.29
PGSC0003DMT400069799	Potato	mitochondrion, plastid	19.12	2.28
Zm00001d009212_P004	Maize	extracellular	20.59	2.28
VIT_05s0077g01210.t01	Wine grape	plastid	19.12	2.28
Solyc05g053100.2.1	Tomato	nucleus	19.12	2.28
CDX75895	Canola	plastid	20.59	2.27
CDX82387	Canola	plastid	20.59	2.27
KRH50756	Soybean	endoplasmic reticulum, nucleus	20.59	2.23
VIT_14s0060g01330.t01	Wine grape	plastid	19.12	2.21
TraesCS1D01G107400.1	Wheat	plastid	19.12	2.21
TraesCS1B01G124900.1	Wheat	plastid	19.12	2.21
VIT_14s0060g01410.t01	Wine grape	cytosol	7.35	2.07
HORVU1Hr1G023060.8	Barley	plastid	17.65	2.06
CDY09711	Canola	plasma membrane	8.82	1.58
CDX94793	Canola	endoplasmic reticulum	2.94	1.2
PGSC0003DMT400069988	Potato	cytosol	1.47	0.59
Os05t0156700-01	Rice	plastid	1.47	0.43
KRH37006	Soybean	cytosol	1.47	0.29
Bra012738.1-P	Field mustard	peroxisome	0.0	0.0
CDX90541	Canola	extracellular, nucleus, peroxisome	0.0	0.0

Protein Annotations

EnsemblPlants:CDX93023	EnsemblPlantsGene:GSBRNA2T00154914001	Gene3D:3.50.50.60	GO:A0A078E0E9	InterPro:FAD/NAD-bd_sf	InterPro:IPR036188
PANTHER:PTHR43256	PANTHER:PTHR43256:SF4	ProteinID:CDX93023	ProteinID:CDX93023.1	UniParc:UPI0004EE0327	MapMan:35.1

Description

BnaA03g37450D

Coordinates

chrLK031874:+:763237..763876

Molecular Weight (calculated)

7930.5 Da

IEP (calculated)

9.115

GRAVY (calculated)

-0.569

Length

68 amino acids

Sequence
(BLAST)

1: MPITKKYPII RGCVPKKLIV YASKYTHEFE DSHGFGWKYD TEPSHDWSTL IANKNAELQR LTAIYKCP

Best Arabidopsis Sequence Match ( AT3G54660.1 )
(BLAST)

001: MASTPKLTST ISSSSPSLQF LCKKLPIAIH LPSSSSSSFL SLPKTLTSLY SLRPRIALLS NHRYYHSRRF SVCASTDNGA ESDRHYDFDL FTIGAGSGGV
101: RASRFATSFG ASAAVCELPF STISSDTAGG VGGTCVLRGC VPKKLLVYAS KYSHEFEDSH GFGWKYETEP SHDWTTLIAN KNAELQRLTG IYKNILSKAN
201: VKLIEGRGKV IDPHTVDVDG KIYTTRNILI AVGGRPFIPD IPGKEFAIDS DAALDLPSKP KKIAIVGGGY IALEFAGIFN GLNCEVHVFI RQKKVLRGFD
301: EDVRDFVGEQ MSLRGIEFHT EESPEAIIKA GDGSFSLKTS KGTVEGFSHV MFATGRKPNT KNLGLENVGV KMAKNGAIEV DEYSQTSVPS IWAVGDVTDR
401: INLTPVALME GGALAKTLFQ NEPTKPDYRA VPCAVFSQPP IGTVGLTEEQ AIEQYGDVDV YTSNFRPLKA TLSGLPDRVF MKLIVCANTN KVLGVHMCGE
501: DSPEIIQGFG VAVKAGLTKA DFDATVGVHP TAAEEFVTMR APTRKFRKDS SEGKASPEAK TAAGV

Arabidopsis Description

EMB2360At3g54660 [Source:UniProtKB/TrEMBL;Acc:Q5FV38]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.