Factsheet for PGSC0003DMT400076297

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
peroxisome 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

cytosol: 22313117
extracellular: 24773703

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

msms PMID: 24773703 doi

T Bengtsson, D Weighill, E Proux-Wéra, F Levander, S Resjö, DD Burra, LI Moushib, PE Hedley, E Liljeroth, D Jacobson, E Alexandersson, E Andreasson

Department of Plant Protection Biology, Swedish University of Agricultural Sciences, Box 102, SE-230 53 Alnarp, Sweden. erik.alexandersson@slu.se.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	18.49	76.34
Solyc09g091840.2.1	Tomato	extracellular	87.5	74.01
VIT_05s0051g00870.t01	Wine grape	cytosol	84.9	65.73
Bra001931.1-P	Field mustard	cytosol	80.21	63.64
CDX92998	Canola	cytosol	80.21	63.64
Bra015006.1-P	Field mustard	cytosol	79.69	62.96
CDX77463	Canola	cytosol	79.69	62.96
CDX85155	Canola	cytosol	78.91	62.6
AT3G24170.1	Thale cress	cytosol	80.21	61.72
KRH08536	Soybean	cytosol	80.47	61.68
KRH70193	Soybean	cytosol, nucleus	80.47	61.68
GSMUA_Achr1P10930_001	Banana	cytosol	75.0	59.02
CDX94838	Canola	cytosol	79.95	58.03
KXG31334	Sorghum	cytosol	72.14	55.96
Os02t0813500-01	Rice	cytosol, plasma membrane	71.09	55.04
TraesCS6D01G368800.1	Wheat	cytosol	70.31	54.44
TraesCS6B01G423100.1	Wheat	cytosol	70.05	54.12
TraesCS6A01G383800.1	Wheat	cytosol	70.83	54.08
Zm00001d018454_P004	Maize	cytosol	71.35	51.8
GSMUA_AchrUn_...	Banana	cytosol	48.18	51.53
TraesCS6B01G423000.1	Wheat	cytosol	63.54	48.61
TraesCS2D01G236300.1	Wheat	cytosol	16.93	47.79
HORVU6Hr1G089780.1	Barley	cytosol	37.5	46.91
TraesCS6D01G201200.1	Wheat	cytosol	17.97	36.51
PGSC0003DMT400019491	Potato	cytosol, extracellular, plastid	51.3	35.43
HORVU0Hr1G017540.7	Barley	peroxisome	24.74	29.23
PGSC0003DMT400011741	Potato	mitochondrion	28.65	21.83
PGSC0003DMT400069840	Potato	mitochondrion	28.12	21.6
PGSC0003DMT400069799	Potato	mitochondrion, plastid	28.65	19.3
PGSC0003DMT400007182	Potato	extracellular	28.39	19.12
PGSC0003DMT400069988	Potato	cytosol	4.17	9.47

Protein Annotations

MapMan:10.4.1.4	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016668	GO:GO:0055114	InterPro:IPR036188	UniProt:M1CWI5
PFAM:PF07992	EnsemblPlantsGene:PGSC0003DMG400029663	PGSC:PGSC0003DMG400029663	EnsemblPlants:PGSC0003DMT400076297	PRINTS:PR00368	PRINTS:PR00411
ScanProsite:PS00076	PANTHER:PTHR43256	PANTHER:PTHR43256:SF6	InterPro:Pyr_OxRdtase_I_AS	SUPFAM:SSF51905	UniParc:UPI000295A977

Description

Glutathione reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400029663]

Coordinates

chr9:-:58735757..58744877

Molecular Weight (calculated)

41881.6 Da

IEP (calculated)

6.941

GRAVY (calculated)

-0.146

Length

384 amino acids

Sequence
(BLAST)

001: MARKMLIDGE LSKPGEEEAH YDFDLFVIGA GSGGVRASRF SAQYGAKVAI CELPFDPIGS EVSGGVGGTC VLRGCVPKKI LVYGAAYGPE LEDARNYGWE
101: VNEKVNFNWK KLLHKKTEEI VRLNGIYKRL LSNAGVKLFE GEGRVVGPNE VELIQLDGTK ISYSAKHILI ATGSRAHRPD IPGQELAITS DEALSLEELP
201: KRAVILGGGY IAVEFASIWR GMGSTVDLCF RKELPLRGFD DEMRAVVARN LEGRGITMHP CTTLTKLEKT EGGIKVHTDH GEVILADVVL VATGRLPNTK
301: RLNLDAVGVE LDNMKAVKVD EYSRTNIPSI WAIGDVTNRM NLTPVALMEG TCFAVGIHPS AAEEFVTMRS ESRRISSNKP KTNL

Best Arabidopsis Sequence Match ( AT3G24170.3 )
(BLAST)

001: MARKMLVDGE IDKVAADEAN ATHYDFDLFV IGAGSGGVRA ARFSANHGAK VGICELPFHP ISSEEIGGVG GTCVIRGCVP KKILVYGATY GGELEDAKNY
101: GWEINEKVDF TWKKLLQKKT DEILRLNNIY KRLLANAAVK LYEGEGRVVG PNEVEVRQID GTKISYTAKH ILIATGSRAQ KPNIPGHELA ITSDEALSLE
201: EFPKRAIVLG GGYIAVEFAS IWRGMGATVD LFFRKELPLR GFDDEMRALV ARNLEGRGVN LHPQTSLTQL TKTDQGIKVI SSHGEEFVAD VVLFATGRSP
301: NTKRLNLEAV GVELDQAGAV KVDEYSRTNI PSIWAVGDAT NRINLTPVAL MEATCFANTA FGGKPTKAEY SNVACAVFCI PPLAVVGLSE EEAVEQATGD
401: ILVFTSGFNP MKNTISGRQE KTLMKLIVDE KSDKVIGASM CGPDAAEIMQ GIAIALKCGA TKAQFDSTVG IHPSSAEEFV TMRSVTRRIA HKPKPKTNL

Arabidopsis Description

ATGR1Glutathione reductase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P48641]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.