Factsheet for VIT_05s0051g00870.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	15.93	84.95
PGSC0003DMT400076297	Potato	cytosol	65.73	84.9
KRH08536	Soybean	cytosol	84.68	83.83
KRH70193	Soybean	cytosol, nucleus	83.67	82.83
Solyc09g091840.2.1	Tomato	extracellular	75.4	82.38
GSMUA_Achr1P10930_001	Banana	cytosol	81.05	82.38
GSMUA_AchrUn_...	Banana	cytosol	58.06	80.22
AT3G24170.1	Thale cress	cytosol	80.65	80.16
CDX77463	Canola	cytosol	78.43	80.04
Bra015006.1-P	Field mustard	cytosol	78.43	80.04
CDX85155	Canola	cytosol	78.02	79.96
CDX92998	Canola	cytosol	77.62	79.55
Bra001931.1-P	Field mustard	cytosol	77.62	79.55
HORVU6Hr1G089780.1	Barley	cytosol	47.98	77.52
KXG31334	Sorghum	cytosol	76.41	76.57
CDX94838	Canola	cytosol	80.44	75.43
Os02t0813500-01	Rice	cytosol, plasma membrane	75.0	75.0
TraesCS6D01G368800.1	Wheat	cytosol	74.19	74.19
TraesCS6B01G423100.1	Wheat	cytosol	74.19	74.04
TraesCS6A01G383800.1	Wheat	cytosol	74.6	73.56
Zm00001d018454_P004	Maize	cytosol	76.21	71.46
TraesCS6B01G423000.1	Wheat	cytosol	66.33	65.54
TraesCS2D01G236300.1	Wheat	cytosol	13.91	50.74
VIT_07s0141g00390.t01	Wine grape	plastid	53.63	47.59
TraesCS6D01G201200.1	Wheat	cytosol	15.93	41.8
HORVU0Hr1G017540.7	Barley	peroxisome	20.36	31.08
VIT_05s0020g00380.t01	Wine grape	mitochondrion	27.82	27.49
VIT_05s0077g01210.t01	Wine grape	plastid	27.62	23.99
VIT_14s0060g01330.t01	Wine grape	plastid	27.42	23.13
VIT_14s0060g01410.t01	Wine grape	cytosol	10.48	21.49

Protein Annotations

KEGG:00480+1.8.1.7	MapMan:10.4.1.4	EntrezGene:100254507	wikigene:100254507	Gene3D:3.30.390.30	Gene3D:3.50.50.60
ProteinID:AGG09347	ProteinID:AGG09347.1	EMBL:AM456584	EMBL:AM459864	ProteinID:CAN65542	ProteinID:CAN65542.1
ProteinID:CAN74593	ProteinID:CAN74593.1	ProteinID:CBI33364	ProteinID:CBI33364.3	UniProt:D7TS92	InterPro:FAD/NAD-bd_sf
InterPro:FAD/NAD-binding_dom	InterPro:FAD/NAD-linked_Rdtase_dimer_sf	EMBL:FN596241	GO:GO:0000166	GO:GO:0000305	GO:GO:0003674
GO:GO:0003824	GO:GO:0004362	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005777	GO:GO:0006091	GO:GO:0006749	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0016491	GO:GO:0016668	GO:GO:0019725
GO:GO:0022900	GO:GO:0045454	GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	GO:GO:0098869
InterPro:Glut-diS_reduct	InterPro:IPR016156	InterPro:IPR036188	EMBL:KC195961	EntrezGene:LOC100254507	wikigene:LOC100254507
PFAM:PF02852	PFAM:PF07992	PIRSF:PIRSF000350	PRINTS:PR00368	PRINTS:PR00411	ScanProsite:PS00076
PANTHER:PTHR43256	PANTHER:PTHR43256:SF6	InterPro:Pyr_OxRdtase_I_AS	InterPro:Pyr_nuc-diS_OxRdtase	InterPro:Pyr_nucl-diS_OxRdtase_dimer	SUPFAM:SSF51905
SUPFAM:SSF55424	TIGR:TC53487	TIGR:TC65336	TIGRFAMs:TIGR01424	UniParc:UPI00015C7DB5	ArrayExpress:VIT_05s0051g00870
EnsemblPlantsGene:VIT_05s0051g00870	EnsemblPlants:VIT_05s0051g00870.t01	unigene:Vvi.6776	RefSeq:XP_002285672	RefSeq:XP_002285672.1	RefSeq:XP_010650233.1

Description

No Description!

Coordinates

chr5:-:12014586..12073403

Molecular Weight (calculated)

53872.1 Da

IEP (calculated)

5.993

GRAVY (calculated)

-0.089

Length

496 amino acids

Sequence
(BLAST)

001: MARKMLIDGE LSKPNEEETH YDFDLFVIGA GSGGVRAARF SANFGAKVAI CELPFHPVSS EVIGGVGGTC VIRGCVPKKI LVYGASFRGE IEDAKNYGWE
101: LNDKVDFNWK KLLHKKTEEI VRLNGIYKRL LTNAGVKLYE GEGKIVGPNE VEVTQLDGTK LCYSAKHILI ATGSRAQRPT IPGQELSITS DEALSLDELP
201: KRAVILGGGY IAVEFASIWN GMGVAVDLFF RKELPLRGFD DEMRAVVARN LEARGINLHP RTTLSELVKT EDGIKVITDH GEELTADVVL FATGRAPNTK
301: RLNLEVVGVE LDKMGAVKVD EYSRTNIPSI WAIGDVTNRM NLTPVALMEG TYFAKTVFGG QPSKPDYKDI PCAVFCLPPL SVVGLSEEQA TDQAEGDILV
401: FTSTFNPMKN TISGRQEKTI MKLLVDAETD KVLGASMCGP DAPEIMQGIA VALKCGATKA QFDCTVGIHP SAAEEFVTMR SVTRRIAAGN KPKTNL

Best Arabidopsis Sequence Match ( AT3G24170.3 )
(BLAST)

001: MARKMLVDGE IDKVAADEAN ATHYDFDLFV IGAGSGGVRA ARFSANHGAK VGICELPFHP ISSEEIGGVG GTCVIRGCVP KKILVYGATY GGELEDAKNY
101: GWEINEKVDF TWKKLLQKKT DEILRLNNIY KRLLANAAVK LYEGEGRVVG PNEVEVRQID GTKISYTAKH ILIATGSRAQ KPNIPGHELA ITSDEALSLE
201: EFPKRAIVLG GGYIAVEFAS IWRGMGATVD LFFRKELPLR GFDDEMRALV ARNLEGRGVN LHPQTSLTQL TKTDQGIKVI SSHGEEFVAD VVLFATGRSP
301: NTKRLNLEAV GVELDQAGAV KVDEYSRTNI PSIWAVGDAT NRINLTPVAL MEATCFANTA FGGKPTKAEY SNVACAVFCI PPLAVVGLSE EEAVEQATGD
401: ILVFTSGFNP MKNTISGRQE KTLMKLIVDE KSDKVIGASM CGPDAAEIMQ GIAIALKCGA TKAQFDSTVG IHPSSAEEFV TMRSVTRRIA HKPKPKTNL

Arabidopsis Description

ATGR1Glutathione reductase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P48641]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.