Factsheet for Solyc09g091840.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 3
cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	plastid
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	mitochondrion
PTS1:	peroxisome
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 22364583
extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400076297	Potato	cytosol	74.01	87.5
GSMUA_AchrUn_...	Banana	cytosol	60.35	76.32
VIT_05s0051g00870.t01	Wine grape	cytosol	82.38	75.4
HORVU6Hr1G089780.1	Barley	cytosol	49.34	72.96
KRH08536	Soybean	cytosol	79.96	72.46
KRH70193	Soybean	cytosol, nucleus	79.3	71.86
AT3G24170.1	Thale cress	cytosol	78.41	71.34
Bra001931.1-P	Field mustard	cytosol	75.77	71.07
CDX92998	Canola	cytosol	75.77	71.07
GSMUA_Achr1P10930_001	Banana	cytosol	75.99	70.7
Bra015006.1-P	Field mustard	cytosol	74.67	69.75
CDX77463	Canola	cytosol	74.67	69.75
CDX85155	Canola	cytosol	74.23	69.63
CDX94838	Canola	cytosol	78.85	67.67
KXG31334	Sorghum	cytosol	72.69	66.67
Os02t0813500-01	Rice	cytosol, plasma membrane	72.47	66.33
TraesCS6B01G423100.1	Wheat	cytosol	71.59	65.39
TraesCS6D01G368800.1	Wheat	cytosol	70.7	64.72
TraesCS6A01G383800.1	Wheat	cytosol	71.37	64.41
Zm00001d018454_P004	Maize	cytosol	71.37	61.25
TraesCS6B01G423000.1	Wheat	cytosol	63.66	57.57
Solyc09g065900.2.1	Tomato	plastid	51.76	42.19
GSMUA_AchrUn_...	Banana	cytosol	8.15	39.78
TraesCS2D01G236300.1	Wheat	cytosol	8.59	28.68
TraesCS6D01G201200.1	Wheat	cytosol	11.01	26.45
HORVU0Hr1G017540.7	Barley	peroxisome	18.28	25.54
Solyc12g099100.1.1	Tomato	plastid	27.09	24.4
Solyc05g053300.2.1	Tomato	extracellular, mitochondrion, nucleus, plastid, unclear	26.65	24.2
Solyc01g100360.2.1	Tomato	plastid	26.87	21.4
Solyc05g053100.2.1	Tomato	nucleus	26.87	21.37

Protein Annotations

KEGG:00480+1.8.1.7	MapMan:10.4.1.4	Gene3D:3.30.390.30	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:FAD/NAD-binding_dom
InterPro:FAD/NAD-linked_Rdtase_dimer_sf	GO:GO:0000166	GO:GO:0000305	GO:GO:0003674	GO:GO:0003824	GO:GO:0004362
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777
GO:GO:0006091	GO:GO:0006749	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009987	GO:GO:0016491	GO:GO:0016668	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	GO:GO:0098869	InterPro:Glut-diS_reduct	InterPro:IPR016156
InterPro:IPR036188	UniProt:K4CWL0	PFAM:PF02852	PFAM:PF07992	PIRSF:PIRSF000350	PRINTS:PR00368
PRINTS:PR00411	ScanProsite:PS00076	PANTHER:PTHR43256	PANTHER:PTHR43256:SF6	InterPro:Pyr_OxRdtase_I_AS	InterPro:Pyr_nuc-diS_OxRdtase
InterPro:Pyr_nucl-diS_OxRdtase_dimer	SUPFAM:SSF51905	SUPFAM:SSF55424	EnsemblPlantsGene:Solyc09g091840.2	EnsemblPlants:Solyc09g091840.2.1	TIGRFAMs:TIGR01424
UniParc:UPI000276B786	:	:	:	:	:

Description

No Description!

Coordinates

chr9:-:71041962..71051849

Molecular Weight (calculated)

49384.8 Da

IEP (calculated)

6.516

GRAVY (calculated)

-0.101

Length

454 amino acids

Sequence
(BLAST)

001: MELRYMVAIC ELPFDPIGSE VSGGVGGTCV LRGCVPKKIL VYGAAYGPEL EDAKNYGWEV NENVNFNWKK LLHKKTEEIV RLNGIYKRLL SNAGVKLFEG
101: EGRVVGPNEV ELIQLDGTKI SYSAKHILIA TGSRAHRPDI PGQELAITSD EALSLEELPK RAVILGGGYI AVEFASIWRG MGSTVDLCFR KELPLRGFDD
201: EMRAVVARNL EGRGITMHPC TTLTKLEKAE GGIKVHTDHG EVILADVVLV ATGRLPNTKR LNLDAVGVEL DNMKAVKVDE YSRTNIPSIW AIGDVTNRMN
301: LTPVALMEGT CFAKTVFGGK PTKPDYSHIP CAVFCIPPLS VVGFSEEQAI EQINGEVSVY TSSFNPMKNT ISGRTEKSVM KLLVDAQTDK VIGASMCGPD
401: APEIMQGIAV ALKCGATKEQ FDSTVGIHPS AAEEFVTMRS ESRRISSNKP KTNL

Best Arabidopsis Sequence Match ( AT3G24170.3 )
(BLAST)

001: MARKMLVDGE IDKVAADEAN ATHYDFDLFV IGAGSGGVRA ARFSANHGAK VGICELPFHP ISSEEIGGVG GTCVIRGCVP KKILVYGATY GGELEDAKNY
101: GWEINEKVDF TWKKLLQKKT DEILRLNNIY KRLLANAAVK LYEGEGRVVG PNEVEVRQID GTKISYTAKH ILIATGSRAQ KPNIPGHELA ITSDEALSLE
201: EFPKRAIVLG GGYIAVEFAS IWRGMGATVD LFFRKELPLR GFDDEMRALV ARNLEGRGVN LHPQTSLTQL TKTDQGIKVI SSHGEEFVAD VVLFATGRSP
301: NTKRLNLEAV GVELDQAGAV KVDEYSRTNI PSIWAVGDAT NRINLTPVAL MEATCFANTA FGGKPTKAEY SNVACAVFCI PPLAVVGLSE EEAVEQATGD
401: ILVFTSGFNP MKNTISGRQE KTLMKLIVDE KSDKVIGASM CGPDAAEIMQ GIAIALKCGA TKAQFDSTVG IHPSSAEEFV TMRSVTRRIA HKPKPKTNL

Arabidopsis Description

ATGR1Glutathione reductase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P48641]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.