Factsheet for Os02t0754500-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 3
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0276200-00
Os03t0163300-01
Os03t0323800-01
Os10t0415300-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G09420.1	Os01t0276200-00	AT3G20000.1	17981999
AT5G09420.1	Os03t0323800-01	AT3G20000.1	17981999
AT5G09420.1	Os03t0163300-01	AT3G54660.1	17981999
AT5G09420.1	Os10t0415300-02	AT3G54660.1	17981999

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G298000.1	Wheat	plastid	76.35	76.85
TraesCS6A01G318800.1	Wheat	plastid	76.02	76.52
TraesCS6B01G349000.1	Wheat	plastid	76.02	76.52
KXG30729	Sorghum	plastid	75.86	75.73
Zm00001d018098_P005	Maize	plasma membrane	74.88	74.76
HORVU6Hr1G078210.1	Barley	mitochondrion	62.48	68.64
GSMUA_Achr9P14860_001	Banana	mitochondrion	59.05	58.11
KRH10544	Soybean	golgi	55.95	57.36
KRH43896	Soybean	cytosol, endoplasmic reticulum	55.46	56.86
KRH58262	Soybean	cytosol	25.77	56.83
Solyc10g047300.1.1	Tomato	plastid	55.14	56.52
VIT_12s0028g00300.t01	Wine grape	cytosol	55.95	56.51
PGSC0003DMT400042984	Potato	extracellular, plasma membrane	30.51	56.16
KRH58264	Soybean	golgi, plasma membrane	28.87	54.63
CDY21581	Canola	cytosol	52.69	53.57
AT5G09420.1	Thale cress	cytosol	52.69	53.57
Os03t0707900-01	Rice	plasma membrane	44.54	46.59
Os04t0118100-01	Rice	cytosol	30.02	42.3
Os04t0117900-01	Rice	plasma membrane, plastid	28.87	40.78
Bra009383.1-P	Field mustard	cytosol, plastid	52.85	35.1
Os12t0169000-00	Rice	plasma membrane	17.29	17.88
Os04t0102700-01	Rice	plasma membrane	16.31	16.45
Os11t0170000-01	Rice	peroxisome	16.31	16.39
Os04t0643200-00	Rice	plastid	14.19	16.29
Os11t0536800-01	Rice	golgi, plastid	15.01	13.75
Os04t0118400-01	Rice	extracellular	14.03	10.2
Os02t0519900-01	Rice	nucleus, plasma membrane, plastid	14.03	10.2
Os04t0102600-01	Rice	mitochondrion	1.79	5.34
Os11t0170200-01	Rice	nucleus	0.33	0.22

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:1.25.40.10	MapMan:23.2.1.7	Gene3D:3.90.1300.10	EMBL:AK069965	InterPro:AS_sf
InterPro:Amidase	InterPro:Amidase_dom	ProteinID:BAD17240.1	ProteinID:BAF10069.1	ProteinID:BAS80978.1	ncoils:Coil
ProteinID:EEE57827.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006626
GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0016787	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:IPR036928	EnsemblPlantsGene:Os02g0754500
EnsemblPlants:Os02t0754500-01	PFAM:PF00515	PFAM:PF01425	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR11895
PANTHER:PTHR11895:SF92	UniProt:Q6Z697	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF75304	TMHMM:TMhelix
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat	UniParc:UPI000035AE59	SEG:seg

Description

Tetratricopeptide-like helical domain containing protein. (Os02t0754500-01)

Coordinates

chr2:+:31739493..31747368

Molecular Weight (calculated)

66473.9 Da

IEP (calculated)

9.518

GRAVY (calculated)

-0.126

Length

613 amino acids

Sequence
(BLAST)

001: MDSSARSGGG GTGGYTSTRV WMVAGVAIAG AIVFVEAARR RRRWLRDRSE VPPDFGAFCY RFEIAPAPQP PPPAARQLLS GLTFAASDNF EIEGYVAGFG
101: NPDWKRTHKA ATRTAVPVTM LQKQGGTYVG STVMDELGFG VSGGNLHNGT PINPASPSLF PGGSCSGSAV AVSAQLVDFA LGTDTTGDVR IPACFCGVLC
201: FKSSHGVVST LGTIANSQSL DTIGWFARDP SVLHRVGDVL LPAATGGLTQ TRQLFFADDC FQLLKVPNEK TVNVIENAIQ TLPGYQPPKH INIGEYISSH
301: VPSLKDFCEP TVEMLEGMSA LKALSTVMLL LQRYEFKTNH EDWVNTVKPK LGLDTSTRVL QAVNSKSDNI KSLYIVRNEL RAALKNLLKD TGILVLPTTA
401: GYPLKRNARQ RLSPGFEDRM SAFVGIATLS GCCQAVIPLG SHNDHPISLS LLAAHGSDKF LLRNVLYMFS SIKEQVVLAS KLVTAPVINR DADFGAAELL
501: KEKGNSAFKG RKWSKAVEFY SDAIKLNGTN ATYYSNRAAA YLELGRYKQA EADCEQALLL DKKNVKAYLR RGIAREAVLN HQEALQDIRH ALALEPQNKA
601: GLLAERRLQK KLR

Best Arabidopsis Sequence Match ( AT5G09420.1 )
(BLAST)

001: MSNTLSLIQS NASNPKVWVV IGVTVAGIVI LAETRKRRIR ALREEDFGAF LDRFELLPFP PPPPPAAKQS LSGLTFSISD AFDVKDYITG FGCPQWKKTH
101: EAAEKTAVVV TTLLKNGATC VGKTIMDELG FGIIGENKHY GTPINPLMPD NVPGGCSSGS AVSVGAELVD FSLGIDTTGG VRVPAAFCGI LGFRPSQGTV
201: SSVGVLPNSQ SLETVGWFAS DPSVLCQVGH ALLNLSAVTH RRQRSLIFAD DLFELSDIPK QKSVQVVRKA IENLSGYKTP KHVNVGQYVA SNVPSLAEFC
301: EQSGKSQNSA STLRALSSVM LAIQRHEFKT NHEEWWQTCK SFLGPRFSND VVTALKSKNE SIKSLYRVKN EMRATIQSLL KEDGILVIPT VADPPPRLNT
401: KRNKSLNEFL DRTYALSCIA SMSGCCQVTI PLGEHGDRPI SVSLLTYYGG DKFLLDTTLD VYASLQDQAK LASNLAPVSD TNGNMEASEV MKEKGNAAYK
501: GKQWNKAVNF YTEAIKLNGA NATYYCNRAA AFLELCCFQQ AEQDCTKAML IDKKNVKAYL RRGTARESLV RYKEAAADFR HALVLEPQNK TAKVAEKRLR
601: KHI

Arabidopsis Description

OM64Outer envelope protein 64, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4KCL7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.