Factsheet for Zm00001d018098_P005

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d008242_P001
Zm00001d027769_P001
Zm00001d028971_P001
Zm00001d040440_P001
Zm00001d047566_P008

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G09420.1	Zm00001d008242_P001	AT3G20000.1	17981999
AT5G09420.1	Zm00001d028971_P001	AT3G20000.1	17981999
AT5G09420.1	Zm00001d040440_P001	AT3G20000.1	17981999
AT5G09420.1	Zm00001d047566_P008	AT3G20000.1	17981999
AT5G09420.1	Zm00001d027769_P001	AT3G54660.1	17981999

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG30729	Sorghum	plastid	95.11	95.11
TraesCS6B01G349000.1	Wheat	plastid	76.87	77.5
TraesCS6D01G298000.1	Wheat	plastid	76.55	77.18
TraesCS6A01G318800.1	Wheat	plastid	76.22	76.85
Os02t0754500-01	Rice	cytosol, mitochondrion, plastid	74.76	74.88
HORVU6Hr1G078210.1	Barley	mitochondrion	63.03	69.35
GSMUA_Achr9P14860_001	Banana	mitochondrion	59.61	58.75
VIT_12s0028g00300.t01	Wine grape	cytosol	57.82	58.48
KRH58262	Soybean	cytosol	26.22	57.91
KRH10544	Soybean	golgi	55.54	57.02
KRH43896	Soybean	cytosol, endoplasmic reticulum	55.54	57.02
Solyc10g047300.1.1	Tomato	plastid	54.89	56.35
PGSC0003DMT400042984	Potato	extracellular, plasma membrane	30.46	56.16
KRH58264	Soybean	golgi, plasma membrane	29.15	55.25
CDY21581	Canola	cytosol	53.58	54.56
AT5G09420.1	Thale cress	cytosol	52.77	53.73
Zm00001d033682_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	43.97	44.85
Zm00001d006886_P002	Maize	cytosol	29.15	40.32
Zm00001d013463_P001	Maize	golgi, plasma membrane, vacuole	26.55	36.88
Bra009383.1-P	Field mustard	cytosol, plastid	54.56	36.29
Zm00001d023543_P003	Maize	cytosol, endoplasmic reticulum, peroxisome	18.24	17.78
Zm00001d002104_P001	Maize	mitochondrion, plastid	15.64	17.58
Zm00001d004817_P002	Maize	cytosol, golgi, peroxisome	17.59	17.31
Zm00001d024936_P002	Maize	mitochondrion	15.96	14.16
Zm00001d052660_P002	Maize	mitochondrion	14.01	13.09

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:1.25.40.10	EntrezGene:100281793	MapMan:23.2.1.7	Gene3D:3.90.1300.10	UniProt:A0A1D6HKR0
ProteinID:AQK75016.1	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004040	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006626	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016787	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	InterPro:IPR036928	PFAM:PF00515	PFAM:PF01425	PFscan:PS50005	PFscan:PS50293
PANTHER:PTHR11895	PANTHER:PTHR11895:SF92	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF75304	TMHMM:TMhelix
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat	UniParc:UPI000221388C	EnsemblPlantsGene:Zm00001d018098
EnsemblPlants:Zm00001d018098_P005	EnsemblPlants:Zm00001d018098_T005	SEG:seg	:	:	:

Description

Amidase

Coordinates

chr5:+:214145724..214154193

Molecular Weight (calculated)

67010.6 Da

IEP (calculated)

9.261

GRAVY (calculated)

-0.091

Length

614 amino acids

Sequence
(BLAST)

001: MASSSQSGGA GGGGTVASNP RVWIVASIAV AGVLVLAEVA RRRRRWLRGM SGTAPDAGSF CDRFELHPPA QPPPPAARHI LSGLTFAASD NFEIEGYVAG
101: FGNPDWKKTH ETARHTAVAV TMLRKQGATC VGRTIMDELG FGVTGENLHH GTPANPVSSS LVPGGSCSGS AVAVAAQLID FAIGTDTIGD VRIPASFCGL
201: LCFRPSYGVI STLGTIANSQ SLDTIGWFAR DPCILHRVGE VLLPAAVGGL KQTRQFVFAD DCFQLLKVSN QKTVHAIKNA VQALRGYQPP KHINIGQYIY
301: SNVPSLKEFC EPATKLEEGT SALKAISTVM LLLQRYEFKA NHEEWVNTVK PKLGLDISTR VLQAVNFARE NIKSLYAIRN ELRVALKNLL KDTGILVLPT
401: TAGYPLKRNS KERLSSGFED RMYKFVGVAA LSGCCEVTIP MENLDHHVSL SFVAAHGSDK FLLRNILDTY SLIQDQVVLA SKLETAPVTN VDVDVNASEL
501: LKEKGNSAFK RRQWIKAIEF YSEAISLSDT NATYYCNRAA AYLELGRFKQ AEADCDRALL LDRKNVKAYL RRGFAREVTL NYKEALQDFR HALALEPQNK
601: TALAAERRLQ KLLK

Best Arabidopsis Sequence Match ( AT5G09420.1 )
(BLAST)

001: MSNTLSLIQS NASNPKVWVV IGVTVAGIVI LAETRKRRIR ALREEDFGAF LDRFELLPFP PPPPPAAKQS LSGLTFSISD AFDVKDYITG FGCPQWKKTH
101: EAAEKTAVVV TTLLKNGATC VGKTIMDELG FGIIGENKHY GTPINPLMPD NVPGGCSSGS AVSVGAELVD FSLGIDTTGG VRVPAAFCGI LGFRPSQGTV
201: SSVGVLPNSQ SLETVGWFAS DPSVLCQVGH ALLNLSAVTH RRQRSLIFAD DLFELSDIPK QKSVQVVRKA IENLSGYKTP KHVNVGQYVA SNVPSLAEFC
301: EQSGKSQNSA STLRALSSVM LAIQRHEFKT NHEEWWQTCK SFLGPRFSND VVTALKSKNE SIKSLYRVKN EMRATIQSLL KEDGILVIPT VADPPPRLNT
401: KRNKSLNEFL DRTYALSCIA SMSGCCQVTI PLGEHGDRPI SVSLLTYYGG DKFLLDTTLD VYASLQDQAK LASNLAPVSD TNGNMEASEV MKEKGNAAYK
501: GKQWNKAVNF YTEAIKLNGA NATYYCNRAA AFLELCCFQQ AEQDCTKAML IDKKNVKAYL RRGTARESLV RYKEAAADFR HALVLEPQNK TAKVAEKRLR
601: KHI

Arabidopsis Description

OM64Outer envelope protein 64, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4KCL7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.