Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21581 | Canola | cytosol | 85.74 | 85.74 |
| VIT_12s0028g00300.t01 | Wine grape | cytosol | 65.84 | 65.4 |
| PGSC0003DMT400042984 | Potato | extracellular, plasma membrane | 35.66 | 64.56 |
| KRH58264 | Soybean | golgi, plasma membrane | 34.66 | 64.51 |
| Solyc10g047300.1.1 | Tomato | plastid | 63.35 | 63.88 |
| KRH10544 | Soybean | golgi | 62.35 | 62.88 |
| KRH43896 | Soybean | cytosol, endoplasmic reticulum | 62.19 | 62.71 |
| KRH58262 | Soybean | cytosol | 28.86 | 62.59 |
| GSMUA_Achr9P14860_001 | Banana | mitochondrion | 59.54 | 57.62 |
| Bra009383.1-P | Field mustard | cytosol, plastid | 85.74 | 56.01 |
| TraesCS6A01G318800.1 | Wheat | plastid | 56.38 | 55.83 |
| TraesCS6B01G349000.1 | Wheat | plastid | 56.22 | 55.66 |
| TraesCS6D01G298000.1 | Wheat | plastid | 55.72 | 55.17 |
| KXG30729 | Sorghum | plastid | 55.22 | 54.23 |
| Zm00001d018098_P005 | Maize | plasma membrane | 53.73 | 52.77 |
| Os02t0754500-01 | Rice | cytosol, mitochondrion, plastid | 53.57 | 52.69 |
| AT3G17970.1 | Thale cress | endoplasmic reticulum | 50.08 | 51.27 |
| HORVU6Hr1G078210.1 | Barley | mitochondrion | 46.77 | 50.54 |
| AT1G08980.1 | Thale cress | cytosol | 33.66 | 47.76 |
| AT3G25660.1 | Thale cress | plastid | 14.93 | 16.76 |
| AT5G64440.1 | Thale cress | cytosol, nucleus, peroxisome | 16.09 | 15.98 |
| AT5G07360.1 | Thale cress | plastid | 15.59 | 14.26 |
Protein Annotations
| KEGG:00970+6.3.5.7 | Gene3D:1.25.40.10 | MapMan:23.2.1.7 | Gene3D:3.90.1300.10 | EntrezGene:830801 | UniProt:A0A178UC85 |
| ProteinID:AED91391.1 | InterPro:AS_sf | ArrayExpress:AT5G09420 | EnsemblPlantsGene:AT5G09420 | RefSeq:AT5G09420 | TAIR:AT5G09420 |
| RefSeq:AT5G09420-TAIR-G | EnsemblPlants:AT5G09420.1 | TAIR:AT5G09420.1 | Symbol:ATTOC64-V | InterPro:Amidase | InterPro:Amidase_dom |
| Unigene:At.10055 | ProteinID:CAC05468.1 | ncoils:Coil | UniProt:F4KCL7 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004040 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005741 | GO:GO:0006626 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016787 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | InterPro:IPR036928 | RefSeq:NP_196504.2 | ProteinID:OAO91393.1 |
| PFAM:PF01425 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000056 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50005 | PFscan:PS50293 |
| PANTHER:PTHR11895 | PANTHER:PTHR11895:SF92 | SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF75304 | InterPro:TPR-contain_dom |
| InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI0000196C6B | SEG:seg | : | : |
Description
OM64Outer envelope protein 64, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4KCL7]
Coordinates
chr5:+:2928173..2932021
Molecular Weight (calculated)
65915.1 Da
IEP (calculated)
8.991
GRAVY (calculated)
-0.188
Length
603 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNTLSLIQS NASNPKVWVV IGVTVAGIVI LAETRKRRIR ALREEDFGAF LDRFELLPFP PPPPPAAKQS LSGLTFSISD AFDVKDYITG FGCPQWKKTH
101: EAAEKTAVVV TTLLKNGATC VGKTIMDELG FGIIGENKHY GTPINPLMPD NVPGGCSSGS AVSVGAELVD FSLGIDTTGG VRVPAAFCGI LGFRPSQGTV
201: SSVGVLPNSQ SLETVGWFAS DPSVLCQVGH ALLNLSAVTH RRQRSLIFAD DLFELSDIPK QKSVQVVRKA IENLSGYKTP KHVNVGQYVA SNVPSLAEFC
301: EQSGKSQNSA STLRALSSVM LAIQRHEFKT NHEEWWQTCK SFLGPRFSND VVTALKSKNE SIKSLYRVKN EMRATIQSLL KEDGILVIPT VADPPPRLNT
401: KRNKSLNEFL DRTYALSCIA SMSGCCQVTI PLGEHGDRPI SVSLLTYYGG DKFLLDTTLD VYASLQDQAK LASNLAPVSD TNGNMEASEV MKEKGNAAYK
501: GKQWNKAVNF YTEAIKLNGA NATYYCNRAA AFLELCCFQQ AEQDCTKAML IDKKNVKAYL RRGTARESLV RYKEAAADFR HALVLEPQNK TAKVAEKRLR
601: KHI
101: EAAEKTAVVV TTLLKNGATC VGKTIMDELG FGIIGENKHY GTPINPLMPD NVPGGCSSGS AVSVGAELVD FSLGIDTTGG VRVPAAFCGI LGFRPSQGTV
201: SSVGVLPNSQ SLETVGWFAS DPSVLCQVGH ALLNLSAVTH RRQRSLIFAD DLFELSDIPK QKSVQVVRKA IENLSGYKTP KHVNVGQYVA SNVPSLAEFC
301: EQSGKSQNSA STLRALSSVM LAIQRHEFKT NHEEWWQTCK SFLGPRFSND VVTALKSKNE SIKSLYRVKN EMRATIQSLL KEDGILVIPT VADPPPRLNT
401: KRNKSLNEFL DRTYALSCIA SMSGCCQVTI PLGEHGDRPI SVSLLTYYGG DKFLLDTTLD VYASLQDQAK LASNLAPVSD TNGNMEASEV MKEKGNAAYK
501: GKQWNKAVNF YTEAIKLNGA NATYYCNRAA AFLELCCFQQ AEQDCTKAML IDKKNVKAYL RRGTARESLV RYKEAAADFR HALVLEPQNK TAKVAEKRLR
601: KHI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.