Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 7
- golgi 5
- extracellular 6
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75952 | Canola | endoplasmic reticulum | 87.1 | 86.95 |
| CDY51926 | Canola | endoplasmic reticulum | 86.25 | 85.96 |
| Bra001692.1-P | Field mustard | endoplasmic reticulum | 86.08 | 85.79 |
| VIT_17s0000g02400.t01 | Wine grape | endoplasmic reticulum | 72.33 | 72.2 |
| Solyc03g118690.2.1 | Tomato | plastid | 69.78 | 69.66 |
| PGSC0003DMT400014757 | Potato | endoplasmic reticulum | 69.1 | 68.98 |
| CDX95800 | Canola | endoplasmic reticulum | 89.47 | 68.89 |
| KRH41841 | Soybean | endoplasmic reticulum | 67.91 | 67.68 |
| KRH60539 | Soybean | extracellular | 67.06 | 67.29 |
| CDX92180 | Canola | endoplasmic reticulum | 89.13 | 65.79 |
| GSMUA_Achr1P21290_001 | Banana | endoplasmic reticulum | 60.61 | 60.3 |
| Os03t0707900-01 | Rice | plasma membrane | 59.08 | 59.39 |
| EER91017 | Sorghum | endoplasmic reticulum, golgi | 58.4 | 58.5 |
| TraesCS4D01G040700.1 | Wheat | endoplasmic reticulum | 58.06 | 58.16 |
| TraesCS4A01G270900.1 | Wheat | endoplasmic reticulum | 57.05 | 57.14 |
| Zm00001d033682_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 58.06 | 56.81 |
| TraesCS4B01G043200.1 | Wheat | endoplasmic reticulum | 55.52 | 55.8 |
| Zm00001d013463_P001 | Maize | golgi, plasma membrane, vacuole | 37.69 | 50.23 |
| AT5G09420.1 | Thale cress | cytosol | 51.27 | 50.08 |
| AT1G08980.1 | Thale cress | cytosol | 34.8 | 48.24 |
| HORVU4Hr1G006870.1 | Barley | plastid | 52.8 | 47.7 |
| AT3G25660.1 | Thale cress | plastid | 15.45 | 16.95 |
| AT5G64440.1 | Thale cress | cytosol, nucleus, peroxisome | 16.13 | 15.65 |
| AT5G07360.1 | Thale cress | plastid | 13.07 | 11.68 |
Protein Annotations
| KEGG:00970+6.3.5.7 | Gene3D:1.25.40.10 | MapMan:23.1.2.4 | Gene3D:3.90.1300.10 | EntrezGene:819660 | ProteinID:AEE76030.1 |
| InterPro:AS_sf | ArrayExpress:AT3G17970 | EnsemblPlantsGene:AT3G17970 | RefSeq:AT3G17970 | TAIR:AT3G17970 | RefSeq:AT3G17970-TAIR-G |
| EnsemblPlants:AT3G17970.1 | TAIR:AT3G17970.1 | InterPro:Amidase | InterPro:Amidase_dom | Unigene:At.8043 | ProteinID:BAB02718.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004040 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009507 |
| GO:GO:0009527 | GO:GO:0009536 | GO:GO:0009707 | GO:GO:0009941 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0031359 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
| InterPro:IPR036928 | RefSeq:NP_188424.2 | PFAM:PF01425 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 |
| PO:PO:0000056 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50005 |
| PFscan:PS50293 | PANTHER:PTHR11895 | PANTHER:PTHR11895:SF39 | UniProt:Q9LVH5 | SMART:SM00028 | SUPFAM:SSF48452 |
| SUPFAM:SSF75304 | TMHMM:TMhelix | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI00000A3664 |
| Symbol:atToc64-III | SEG:seg | : | : | : | : |
Description
OEP64Outer envelope protein 64, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH5]
Coordinates
chr3:+:6147906..6152082
Molecular Weight (calculated)
64028.9 Da
IEP (calculated)
8.516
GRAVY (calculated)
-0.137
Length
589 amino acids
Sequence
(BLAST)
(BLAST)
001: MASQAANLWV LLGLGLAGIL MLTKKLKKTV REDFGAFIDK LMLLPPPQPA PPKAPHPLTG LTFAVSDVFD ITGYVTGFGH PDWVRTHEAA SSTSPVVSTL
101: VEGGATCVGK TVVDEFAFSI SGENKHYDSP TNPAAPTRIP GGACSGAAVA VATNAVDFAL GIDTVGGVRV PAGYCGVLGF KSSYGAISNT GIIPVSSSLD
201: SVGWFARDPN TLRRVGHVLL QLPFATQRNP RQIILADDCF QLLKIPVDRI TQVVTKSAEK LFGRQLLKHQ NLETYFETKV PSLKEFARTK AIANTKVSTS
301: RLLANVMQLL QRHEFLQNHG DWINTVKPAI DPVILSQVCE NPELTNEETE NLNAIRNETR VAIGSLLKDD GILVIPTLPA VPPKLGSKEI TSEDYQNRAS
401: SLLSIASISG CCQVTVPLGH HEKCPISVSF IGRHGGDRFL LDTVQTMYPS LQEYSSIVTD PKSSKKAITK EESAEIAKEK GNQAFKEKLW QKAIGLYSEA
501: IKLSDNNATY YSNRAAAYLE LGGFLQAEED CTKAITLDKK NVKAYLRRGT AREMLGDCKG AIEDFRYALV LEPNNKRASL SAERLRKFQ
101: VEGGATCVGK TVVDEFAFSI SGENKHYDSP TNPAAPTRIP GGACSGAAVA VATNAVDFAL GIDTVGGVRV PAGYCGVLGF KSSYGAISNT GIIPVSSSLD
201: SVGWFARDPN TLRRVGHVLL QLPFATQRNP RQIILADDCF QLLKIPVDRI TQVVTKSAEK LFGRQLLKHQ NLETYFETKV PSLKEFARTK AIANTKVSTS
301: RLLANVMQLL QRHEFLQNHG DWINTVKPAI DPVILSQVCE NPELTNEETE NLNAIRNETR VAIGSLLKDD GILVIPTLPA VPPKLGSKEI TSEDYQNRAS
401: SLLSIASISG CCQVTVPLGH HEKCPISVSF IGRHGGDRFL LDTVQTMYPS LQEYSSIVTD PKSSKKAITK EESAEIAKEK GNQAFKEKLW QKAIGLYSEA
501: IKLSDNNATY YSNRAAAYLE LGGFLQAEED CTKAITLDKK NVKAYLRRGT AREMLGDCKG AIEDFRYALV LEPNNKRASL SAERLRKFQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.