CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001692.1-P	Field mustard	endoplasmic reticulum	96.45	96.45
CDX75952	Canola	endoplasmic reticulum	94.59	94.75
AT3G17970.1	Thale cress	endoplasmic reticulum	85.96	86.25
CDX93679	Canola	mitochondrion	80.37	79.03
CDY40591	Canola	endoplasmic reticulum, golgi	79.19	78.0
CDX95800	Canola	endoplasmic reticulum	90.86	70.2
VIT_17s0000g02400.t01	Wine grape	endoplasmic reticulum	69.54	69.66
CDX92180	Canola	endoplasmic reticulum	91.88	68.05
KRH41841	Soybean	endoplasmic reticulum	67.68	67.68
KRH60539	Soybean	extracellular	66.67	67.12
Solyc03g118690.2.1	Tomato	plastid	66.5	66.61
PGSC0003DMT400014757	Potato	endoplasmic reticulum	65.82	65.93
Os03t0707900-01	Rice	plasma membrane	60.74	61.26
TraesCS4D01G040700.1	Wheat	endoplasmic reticulum	59.56	59.86
TraesCS4A01G270900.1	Wheat	endoplasmic reticulum	59.39	59.69
EER91017	Sorghum	endoplasmic reticulum, golgi	59.39	59.69
Zm00001d033682_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	59.56	58.47
GSMUA_Achr1P21290_001	Banana	endoplasmic reticulum	58.54	58.45
TraesCS4B01G043200.1	Wheat	endoplasmic reticulum	57.19	57.68
Zm00001d013463_P001	Maize	golgi, plasma membrane, vacuole	38.24	51.13
CDX69906	Canola	cytosol, plastid	51.78	50.75
CDY21581	Canola	cytosol	51.61	50.58
HORVU4Hr1G006870.1	Barley	plastid	54.48	49.39
CDY22653	Canola	cytosol	33.33	46.68
CDY06342	Canola	cytosol	32.99	46.21
CDY03602	Canola	cytosol, plastid	21.49	41.5
CDY46509	Canola	cytosol	5.92	19.34
CDY59872	Canola	plastid	15.23	16.73
CDY04173	Canola	plastid	15.06	16.54
CDY31318	Canola	cytosol	16.24	15.66
CDY46805	Canola	cytosol	15.74	15.22
CDX84527	Canola	cytosol	15.23	14.61
CDY58262	Canola	cytosol	14.89	14.29
CDX98979	Canola	plastid	12.86	11.71
CDX70030	Canola	plastid	12.52	11.44
CDX69905	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:1.25.40.10	MapMan:23.1.2.4	Gene3D:3.90.1300.10	GO:A0A078IPN6	UniProt:A0A078IPN6
InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_dom	EnsemblPlants:CDY51926	ProteinID:CDY51926	ProteinID:CDY51926.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004040	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00004512001	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	InterPro:IPR036928	PFAM:PF01425	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR11895
PANTHER:PTHR11895:SF39	MetaCyc:PWY-5921	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF75304	TMHMM:TMhelix
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0004EE64B3	SEG:seg	:

Description

BnaAnng11030DBnaAnng11030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPN6]

Coordinates

chrLK033040:+:20464..24228

Molecular Weight (calculated)

64374.2 Da

IEP (calculated)

9.038

GRAVY (calculated)

-0.187

Length

591 amino acids

Sequence
(BLAST)

001: MASSHASNLW VLLGLGIAGI LLAAKKLKKT IRQDLGAFID KLLLLPPPPP PPPKAPHPLT ALSFAISDLF DVTGYVTGFG HPDWVRTHEP ASSTCPVVST
101: LVEGGATCVG KTVVDELAFS ISGETKHYES PTNPAAHDRI PGGASSGAAV AVATNAVDFA LGIDTVGGVR VPAGYCGVLG FKSSHGAISN AGIIPVSSSL
201: DSVGWFARDP NTLRRVGHVL LHLPFATPRN PRQIILADDY FQLLKIPVDR ITQVVIKSAE KLFGKQLLKH QNLENYFESK VPSLKEYART KAISSTKVPT
301: SRLLANVMQL LQRHEFLQNH GDWINTVKPA IDPVISSQLS ENSKLTNEEI ENLNTVRNQT RAAINSLLKD DGILVIPTMP TIPPKLGSKE IISEDYQNRA
401: SSLLSIASIS GCCQVTVPLG YHEKCPVSVS FIARHGGDRF LLDTVQTMYA SLQENSSVIA DPKSSKKTIS QEESAEMAKE KGNQAFKEKQ WQKAIGLYSE
501: AIKLNDSNGT YYNNRAAAYL EIGSFLQAEE DCTKAITLDK KNVKAYLRRG TAREMLGVYK EAMDDFRHAL VLEPNNKRAS QSAERLRKLF Q

Best Arabidopsis Sequence Match ( AT3G17970.1 )
(BLAST)

001: MASQAANLWV LLGLGLAGIL MLTKKLKKTV REDFGAFIDK LMLLPPPQPA PPKAPHPLTG LTFAVSDVFD ITGYVTGFGH PDWVRTHEAA SSTSPVVSTL
101: VEGGATCVGK TVVDEFAFSI SGENKHYDSP TNPAAPTRIP GGACSGAAVA VATNAVDFAL GIDTVGGVRV PAGYCGVLGF KSSYGAISNT GIIPVSSSLD
201: SVGWFARDPN TLRRVGHVLL QLPFATQRNP RQIILADDCF QLLKIPVDRI TQVVTKSAEK LFGRQLLKHQ NLETYFETKV PSLKEFARTK AIANTKVSTS
301: RLLANVMQLL QRHEFLQNHG DWINTVKPAI DPVILSQVCE NPELTNEETE NLNAIRNETR VAIGSLLKDD GILVIPTLPA VPPKLGSKEI TSEDYQNRAS
401: SLLSIASISG CCQVTVPLGH HEKCPISVSF IGRHGGDRFL LDTVQTMYPS LQEYSSIVTD PKSSKKAITK EESAEIAKEK GNQAFKEKLW QKAIGLYSEA
501: IKLSDNNATY YSNRAAAYLE LGGFLQAEED CTKAITLDKK NVKAYLRRGT AREMLGDCKG AIEDFRYALV LEPNNKRASL SAERLRKFQ

Arabidopsis Description

OEP64Outer envelope protein 64, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.