CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21581	Canola	cytosol	96.52	96.52
CDY51926	Canola	endoplasmic reticulum	50.75	51.78
CDX75952	Canola	endoplasmic reticulum	50.41	51.53
CDX93679	Canola	mitochondrion	48.26	48.42
CDY40591	Canola	endoplasmic reticulum, golgi	47.6	47.83
CDY06342	Canola	cytosol	31.84	45.5
CDY22653	Canola	cytosol	30.85	44.08
CDX95800	Canola	endoplasmic reticulum	50.08	39.48
CDY03602	Canola	cytosol, plastid	19.9	39.22
CDX92180	Canola	endoplasmic reticulum	50.58	38.22
CDY46509	Canola	cytosol	6.63	22.1
CDY59872	Canola	plastid	15.26	17.1
CDY04173	Canola	plastid	15.26	17.1
CDX84527	Canola	cytosol	17.25	16.88
CDY58262	Canola	cytosol	16.92	16.56
CDY31318	Canola	cytosol	16.25	15.99
CDY46805	Canola	cytosol	16.09	15.88
CDX98979	Canola	plastid	16.42	15.25
CDX70030	Canola	plastid	16.09	14.99
Os04t0118400-01	Rice	extracellular	13.6	9.73
Os02t0519900-01	Rice	nucleus, plasma membrane, plastid	13.43	9.61
Solyc12g070080.1.1	Tomato	cytosol, plastid	2.32	9.4
Solyc12g070090.1.1	Tomato	cytosol	2.82	7.87
CDX69905	Canola	mitochondrion	0.0	0.0
Bra022265.1-P	Field mustard	cytosol, mitochondrion	0.0	0.0

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:1.25.40.10	MapMan:23.2.1.7	Gene3D:3.90.1300.10	GO:A0A078BYT1	InterPro:AS_sf
InterPro:Amidase	InterPro:Amidase_dom	EnsemblPlants:CDX69906	ProteinID:CDX69906	ProteinID:CDX69906.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004040	GO:GO:0005488	GO:GO:0005515	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00135979001
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:IPR036928	PFAM:PF01425	PFAM:PF13414
PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR11895	PANTHER:PTHR11895:SF92	MetaCyc:PWY-5921	SMART:SM00028
SUPFAM:SSF48452	SUPFAM:SSF75304	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0004EDB593
SEG:seg	:	:	:	:	:

Description

BnaA10g22550D

Coordinates

chrLK031790:-:2299737..2303269

Molecular Weight (calculated)

65773.0 Da

IEP (calculated)

9.042

GRAVY (calculated)

-0.195

Length

603 amino acids

Sequence
(BLAST)

001: MSKSLTFIQT NASNPKTWVV IGVTVAGIVI LAETRKRRIK ALREEHFGAF LDRFELLPFP PPPPPAAKQT LSGLTFSISD AFDIKDYITG FGSPQWKKTH
101: EAAEKTAVVV TTLLRNGATC VAKTVMDEMG FGITGENKHY GTPINPLMPC NVPGGCSSGS AVSVAAELVD FALGIDTTGG VRIPASFCGI PAFRPSQGTV
201: SSVGVLPNSQ SLETAGWFAR DPSVLCQVGH ALLNLSAVTH KRQRSLIFAD DLFELSDVPK QKSVHVVRKA IENLPGYQAP KHMNVGQYVA SNVPSLAEFC
301: EKSGKSQDSA STLKALASVM LSIQRHEFKT NHEEWSQTCK SFLGPRFSND VVTALKSRNE NIKSLYRVKT EMRATIQSLL KEDGILVIPT VADPPPKLNT
401: KNKNAMNEFL DRNYALASIA SMSGCCQVTI PLGKHGESPI SVSFLAYYGG DKFLLDTILD VYASLQDQAD IAASLAPMTD SNGIEPSEVM KEKGNAAYKG
501: RQWNKAVSCY TEAIKLNGSN ATYFCNRAAA YLELGRFQQA EEDCTEAILI DKKNVKAYLR RGTARESLIR YKESAADFKH ALVLEPQNKT AKIAEKRLRK
601: LMS

Best Arabidopsis Sequence Match ( AT5G09420.1 )
(BLAST)

001: MSNTLSLIQS NASNPKVWVV IGVTVAGIVI LAETRKRRIR ALREEDFGAF LDRFELLPFP PPPPPAAKQS LSGLTFSISD AFDVKDYITG FGCPQWKKTH
101: EAAEKTAVVV TTLLKNGATC VGKTIMDELG FGIIGENKHY GTPINPLMPD NVPGGCSSGS AVSVGAELVD FSLGIDTTGG VRVPAAFCGI LGFRPSQGTV
201: SSVGVLPNSQ SLETVGWFAS DPSVLCQVGH ALLNLSAVTH RRQRSLIFAD DLFELSDIPK QKSVQVVRKA IENLSGYKTP KHVNVGQYVA SNVPSLAEFC
301: EQSGKSQNSA STLRALSSVM LAIQRHEFKT NHEEWWQTCK SFLGPRFSND VVTALKSKNE SIKSLYRVKN EMRATIQSLL KEDGILVIPT VADPPPRLNT
401: KRNKSLNEFL DRTYALSCIA SMSGCCQVTI PLGEHGDRPI SVSLLTYYGG DKFLLDTTLD VYASLQDQAK LASNLAPVSD TNGNMEASEV MKEKGNAAYK
501: GKQWNKAVNF YTEAIKLNGA NATYYCNRAA AFLELCCFQQ AEQDCTKAML IDKKNVKAYL RRGTARESLV RYKEAAADFR HALVLEPQNK TAKVAEKRLR
601: KHI

Arabidopsis Description

OM64Outer envelope protein 64, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4KCL7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.