Factsheet for Bra022265.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69905	Canola	mitochondrion	20.61	10.9
Bra009383.1-P	Field mustard	cytosol, plastid	21.21	3.79
Bra031917.1-P	Field mustard	cytosol	0.61	0.16
TraesCS1D01G421100.1	Wheat	golgi	0.0	0.0
Os02t0519900-01	Rice	nucleus, plasma membrane, plastid	0.0	0.0
Os04t0118400-01	Rice	extracellular	0.0	0.0
Os11t0170000-01	Rice	peroxisome	0.0	0.0
Os11t0170200-01	Rice	nucleus	0.0	0.0
Os12t0169000-00	Rice	plasma membrane	0.0	0.0
Solyc12g070080.1.1	Tomato	cytosol, plastid	0.0	0.0
Solyc12g070090.1.1	Tomato	cytosol	0.0	0.0
TraesCS1A01G413700.1	Wheat	golgi	0.0	0.0
TraesCS1B01G443700.1	Wheat	golgi	0.0	0.0
KRH63971	Soybean	cytosol, golgi, peroxisome	0.0	0.0
TraesCS4A01G206800.1	Wheat	cytosol	0.0	0.0
TraesCS4D01G108100.1	Wheat	cytosol	0.0	0.0
VIT_07s0031g02700.t01	Wine grape	golgi	0.0	0.0
Zm00001d004817_P002	Maize	cytosol, golgi, peroxisome	0.0	0.0
Zm00001d023543_P003	Maize	cytosol, endoplasmic reticulum, peroxisome	0.0	0.0
OQU82976	Sorghum	peroxisome	0.0	0.0
KXG23065	Sorghum	plastid	0.0	0.0
Bra001692.1-P	Field mustard	endoplasmic reticulum	0.0	0.0
KRH59629	Soybean	golgi	0.0	0.0
KRH53966	Soybean	cytosol, golgi, peroxisome	0.0	0.0
KRH40976	Soybean	golgi	0.0	0.0
HORVU4Hr1G019600.11	Barley	cytosol	0.0	0.0
HORVU1Hr1G090770.2	Barley	endoplasmic reticulum, golgi, plasma membrane	0.0	0.0
GSMUA_Achr4P18290_001	Banana	plastid	0.0	0.0
GSMUA_Achr2P20550_001	Banana	mitochondrion	0.0	0.0
CDX69906	Canola	cytosol, plastid	0.0	0.0
Bra031652.1-P	Field mustard	cytosol	0.0	0.0
Bra026512.1-P	Field mustard	cytosol	0.0	0.0
Bra018737.1-P	Field mustard	mitochondrion	0.0	0.0
Bra017354.1-P	Field mustard	cytosol, peroxisome, plastid	0.0	0.0
Bra009269.1-P	Field mustard	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:Bra022265.1	EnsemblPlants:Bra022265.1-P	EnsemblPlantsGene:Bra022265	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR23180	PANTHER:PTHR23180:SF310	PFAM:PF00168	PFscan:PS50004
SEG:seg	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI000254745C	UniProt:M4E0G8	MapMan:11.1.2.1.2

Description

AT3G17980 (E=4e-068) | C2 domain-containing protein

Coordinates

chrA05:-:18766599..18767246

Molecular Weight (calculated)

18671.8 Da

IEP (calculated)

6.267

GRAVY (calculated)

-0.230

Length

165 amino acids

Sequence
(BLAST)

001: MNNLLGLLRI RIKRGVNLAV RDINSSDPYV VVKMGKQKLK TRVINKDVNP EWNEDLTLSV TDPTLTVLLT VYDHDMFSKD DKMGDAEFEI KPYIEALKMH
101: LDGLPSGTIV TTVQPCRRNC LAEESKVTWV DGKLVQDLVL RLRHVECGEV EAQLQWIDLP GSKGL

Best Arabidopsis Sequence Match ( AT3G17980.1 )
(BLAST)

001: MTTACPARTS SLMDDLLGLL RIRIKRGVNL AVRDISSSDP YVVVKMGKQK LKTRVINKDV NPEWNEDLTL SVTDSNLTVL LTVYDHDMFS KDDKMGDAEF
101: EIKPYIEALR MQLDGLPSGT IVTTVKPSRR NCLAEESRVT WVDGKLVQDL VLRLRHVECG EVEAQLQWID LPGSKGL

Arabidopsis Description

CAR4Protein C2-DOMAIN ABA-RELATED 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.