Factsheet for TraesCS4D01G108100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G206800.1	Wheat	cytosol	95.87	95.87
HORVU4Hr1G019600.11	Barley	cytosol	94.21	94.21
Zm00001d004817_P002	Maize	cytosol, golgi, peroxisome	80.0	77.56
OQU82976	Sorghum	peroxisome	67.77	77.21
Os11t0170000-01	Rice	peroxisome	77.19	76.56
TraesCS1D01G421100.1	Wheat	golgi	77.19	76.56
VIT_07s0031g02700.t01	Wine grape	golgi	61.16	60.66
KRH59629	Soybean	golgi	59.83	59.54
KRH40976	Soybean	golgi	59.5	59.11
GSMUA_Achr2P20550_001	Banana	mitochondrion	69.59	58.72
Solyc12g070080.1.1	Tomato	cytosol, plastid	14.38	58.39
KRH63971	Soybean	cytosol, golgi, peroxisome	59.34	57.9
KRH53966	Soybean	cytosol, golgi, peroxisome	59.34	57.81
Solyc12g070090.1.1	Tomato	cytosol	16.36	45.83
TraesCS2D01G040000.1	Wheat	cytosol	39.83	40.44
TraesCS2D01G039700.2	Wheat	cytoskeleton, cytosol, peroxisome	41.16	40.42
TraesCS2D01G039600.2	Wheat	mitochondrion, nucleus, peroxisome	40.0	38.6
TraesCS2D01G039900.1	Wheat	mitochondrion	34.88	34.76
TraesCS2D01G521500.1	Wheat	plastid	24.13	26.99
TraesCS5D01G083700.1	Wheat	cytosol	11.74	23.59
TraesCS2D01G573300.1	Wheat	cytosol	16.2	21.83
TraesCS2D01G573400.3	Wheat	cytosol, endoplasmic reticulum, peroxisome	15.04	21.02
TraesCS4D01G040700.1	Wheat	endoplasmic reticulum	18.02	18.54
TraesCS3D01G341200.1	Wheat	mitochondrion, vacuole	18.84	17.78
TraesCS6D01G298000.1	Wheat	plastid	17.19	17.08
Os11t0170200-01	Rice	nucleus	1.65	1.11
Bra022265.1-P	Field mustard	cytosol, mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS4D01G108100.1	EnsemblPlantsGene:TraesCS4D01G108100	Gene3D:3.90.1300.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040
GO:GO:0016787	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_dom	InterPro:IPR036928	KEGG:00970+6.3.5.7
PANTHER:PTHR11895	PANTHER:PTHR11895:SF135	PFAM:PF01425	SEG:seg	SUPFAM:SSF75304	MapMan:35.1

Description

No Description!

Coordinates

chr4D:+:87572184..87577007

Molecular Weight (calculated)

65010.1 Da

IEP (calculated)

6.632

GRAVY (calculated)

-0.025

Length

605 amino acids

Sequence
(BLAST)

001: MGLVCSAPKV YKPAAEVDLG PDSDEHYISP NVKAPRVAGL PVKMFAWVLE TPVLGPLLLY VLKKDNLVNK LVSDADIPEP PLFTPTHTWQ DIPEQNVSLA
101: KPGWSPAARA QEAIDCLPDL ADPSSPGFRR WKIRDFAKAY SSGEITPVMV ARRFLAAVEE CSGPDLNMAL FISYDPEDIV RQAEESTLRY QQGAPLSAMD
201: GVLVAVKDEI DCLPYQTTGG TSWLGKMRPC VADAACVAQL RACGAVLAGK TNMHELGAGT SGINPHHGST RNPYHTARVS GGSSGGSAAA VCAGLCPVAL
301: GADGGGSVRM PAALCGVVGF KPTAGRLSNS GLLPLNWTVG VPGILAATVE DALIAYAAMV DQSRPAHSQP QLNLPMLTST HCMPNIRLAR YGKWFNDSSD
401: NIRGCCDKAL QILRAHYGWE TVDVTVPEVE EMRLAHYVTM GAECSASLAA KYLEKLDKSE IGWDVRIALS AYGSFSSRAY LNAQRIRNRQ MYFHNKIFET
501: ADAIVTPMTG VTAYALQDDA LRTGELDYIN AAAISRYSIA GNFLGLPAIT VTVGYDRGGL PVGLQFIGRP WAEATLLHLA YAMQEACSKS CRKPMVSFDL
601: LSKKE

Best Arabidopsis Sequence Match ( AT5G64440.1 )
(BLAST)

001: MGKYQVMKRA SEVDLSTVKY KAETMKAPHL TGLSFKLFVN LLEAPLIGSL IVDYLKKDNG MTKIFRNTVI PEEPMFRPEF PSQEPEHDVV IVGEDESPID
101: RLETALKCLP QYDPSRSLHA DPVSSFRYWK IRDYAYAYRS KLTTPLQVAK RIISIIEEFG YDKPPTPFLI RFDANEVIKQ AEASTRRFEQ GNPISVLDGI
201: FVTIKDDIDC LPHPTNGGTT WLHEDRSVEK DSAVVSKLRS CGAILLGKAN MHELGMGTTG NNSNYGTTRN PHDPKRYTGG SSSGSAAIVA AGLCSAALGT
301: DGGGSVRIPS ALCGITGLKT TYGRTDMTGS LCEGGTVEII GPLASSLEDA FLVYAAILGS SSADRYNLKP SPPCFPKLLS HNGSNAIGSL RLGKYTKWFN
401: DVSSSDISDK CEDILKLLSN NHGCKVVEIV VPELEEMRAA HVISIGSPTL SSLTPYCEAG KNSKLSYDTR TSFAIFRSFS ASDYIAAQCL RRRLMEYHLN
501: IFKDVDVIVT PTTGMTAPVI PPDALKNGET NIQVTTDLMR FVLAANLLGF PAISVPVGYD KEGLPIGLQI MGRPWAEATV LGLAAAVEEL APVTKKPAIF
601: YDILNTN

Arabidopsis Description

FAAHFatty acid amide hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q7XJJ7]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.