Factsheet for Solyc12g070090.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
golgi 1
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0031g02700.t01	Wine grape	golgi	60.19	21.31
KRH59629	Soybean	golgi	56.48	20.07
KRH40976	Soybean	golgi	56.02	19.87
KRH63971	Soybean	cytosol, golgi, peroxisome	56.02	19.52
KRH53966	Soybean	cytosol, golgi, peroxisome	55.09	19.16
OQU82976	Sorghum	peroxisome	45.37	18.46
HORVU1Hr1G090770.2	Barley	endoplasmic reticulum, golgi, plasma membrane	48.15	17.08
TraesCS1A01G413700.1	Wheat	golgi	47.69	16.91
TraesCS4A01G206800.1	Wheat	cytosol	47.22	16.86
TraesCS1B01G443700.1	Wheat	golgi	47.22	16.72
TraesCS1D01G421100.1	Wheat	golgi	47.22	16.72
TraesCS4D01G108100.1	Wheat	cytosol	45.83	16.36
Os12t0169000-00	Rice	plasma membrane	44.91	16.36
Zm00001d004817_P002	Maize	cytosol, golgi, peroxisome	47.22	16.35
HORVU4Hr1G019600.11	Barley	cytosol	45.37	16.2
Zm00001d023543_P003	Maize	cytosol, endoplasmic reticulum, peroxisome	46.76	16.03
Os11t0170000-01	Rice	peroxisome	42.13	14.92
GSMUA_Achr2P20550_001	Banana	mitochondrion	47.22	14.23
KXG23065	Sorghum	plastid	46.76	13.58
Solyc01g106340.2.1	Tomato	cytosol, golgi, plasma membrane	36.11	12.79
Solyc01g106350.2.1	Tomato	cytosol	35.19	12.67
Solyc01g106360.2.1	Tomato	plastid	35.19	12.5
Solyc01g106330.2.1	Tomato	cytosol	33.8	11.81
Solyc06g068690.2.1	Tomato	extracellular	12.5	4.64
Solyc10g007840.2.1	Tomato	plastid	10.65	4.35
Solyc03g118030.2.1	Tomato	plastid	12.04	4.17
Solyc10g047300.1.1	Tomato	plastid	8.8	3.18
GSMUA_Achr4P18290_001	Banana	plastid	3.7	3.07
Solyc03g118690.2.1	Tomato	plastid	7.87	2.88
Os04t0118400-01	Rice	extracellular	11.11	2.85
Os02t0519900-01	Rice	nucleus, plasma membrane, plastid	11.11	2.85
CDX69906	Canola	cytosol, plastid	7.87	2.82
Solyc10g086170.1.1	Tomato	cytosol	3.7	1.88
Os11t0170200-01	Rice	nucleus	3.7	0.89
Solyc12g070080.1.1	Tomato	cytosol, plastid	0.0	0.0
Bra022265.1-P	Field mustard	cytosol, mitochondrion	0.0	0.0
CDX69905	Canola	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc12g070090.1.1	EnsemblPlantsGene:Solyc12g070090.1	Gene3D:3.90.1300.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	InterPro:AS_sf	InterPro:Amidase
InterPro:Amidase_dom	InterPro:IPR036928	KEGG:00970+6.3.5.7	PANTHER:PTHR11895	PANTHER:PTHR11895:SF67	PFAM:PF01425
SUPFAM:SSF75304	TMHMM:TMhelix	UniParc:UPI000276A695	UniProt:K4DGD2	MapMan:35.1	:

Description

No Description!

Coordinates

chr12:-:29122580..29128842

Molecular Weight (calculated)

24457.4 Da

IEP (calculated)

5.683

GRAVY (calculated)

-0.183

Length

216 amino acids

Sequence
(BLAST)

001: MGFLKTKGEI YKAVEDVDVG PNSNQFYLTA NVKAPRMAGF LVKVFAWLLE TPIFGSTMLY FLKRNNLIHK LVTFAELQES PLYVPLHYYE GGKEEENQSG
101: TSPREQVRQA LECMVAPIKD LKSFSRWSIL DYSTAYNSKV ITPTKVMERF LSAVEQSCTP SMQMSFFINF DAHDILTQAA QSTQRYQQGE ALSVLDGVPI
201: GIKDEIDCMP YPTTVH

Best Arabidopsis Sequence Match ( AT5G64440.1 )
(BLAST)

001: MGKYQVMKRA SEVDLSTVKY KAETMKAPHL TGLSFKLFVN LLEAPLIGSL IVDYLKKDNG MTKIFRNTVI PEEPMFRPEF PSQEPEHDVV IVGEDESPID
101: RLETALKCLP QYDPSRSLHA DPVSSFRYWK IRDYAYAYRS KLTTPLQVAK RIISIIEEFG YDKPPTPFLI RFDANEVIKQ AEASTRRFEQ GNPISVLDGI
201: FVTIKDDIDC LPHPTNGGTT WLHEDRSVEK DSAVVSKLRS CGAILLGKAN MHELGMGTTG NNSNYGTTRN PHDPKRYTGG SSSGSAAIVA AGLCSAALGT
301: DGGGSVRIPS ALCGITGLKT TYGRTDMTGS LCEGGTVEII GPLASSLEDA FLVYAAILGS SSADRYNLKP SPPCFPKLLS HNGSNAIGSL RLGKYTKWFN
401: DVSSSDISDK CEDILKLLSN NHGCKVVEIV VPELEEMRAA HVISIGSPTL SSLTPYCEAG KNSKLSYDTR TSFAIFRSFS ASDYIAAQCL RRRLMEYHLN
501: IFKDVDVIVT PTTGMTAPVI PPDALKNGET NIQVTTDLMR FVLAANLLGF PAISVPVGYD KEGLPIGLQI MGRPWAEATV LGLAAAVEEL APVTKKPAIF
601: YDILNTN

Arabidopsis Description

FAAHFatty acid amide hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q7XJJ7]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.