Factsheet for Solyc03g118690.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
nucleus 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

plastid: 22908117
nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400014757	Potato	endoplasmic reticulum	95.59	95.59
VIT_17s0000g02400.t01	Wine grape	endoplasmic reticulum	73.73	73.73
AT3G17970.1	Thale cress	endoplasmic reticulum	69.66	69.78
KRH41841	Soybean	endoplasmic reticulum	67.8	67.68
KRH60539	Soybean	extracellular	67.29	67.63
CDX75952	Canola	endoplasmic reticulum	67.29	67.29
CDY51926	Canola	endoplasmic reticulum	66.61	66.5
Bra001692.1-P	Field mustard	endoplasmic reticulum	66.44	66.33
CDY40591	Canola	endoplasmic reticulum, golgi	66.44	65.33
Bra018737.1-P	Field mustard	mitochondrion	66.44	65.22
CDX93679	Canola	mitochondrion	66.27	65.06
GSMUA_Achr1P21290_001	Banana	endoplasmic reticulum	61.69	61.49
EER91017	Sorghum	endoplasmic reticulum, golgi	61.02	61.22
Os03t0707900-01	Rice	plasma membrane	60.68	61.09
TraesCS4D01G040700.1	Wheat	endoplasmic reticulum	59.49	59.69
Zm00001d033682_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	60.85	59.63
TraesCS4A01G270900.1	Wheat	endoplasmic reticulum	58.64	58.84
TraesCS4B01G043200.1	Wheat	endoplasmic reticulum	56.95	57.34
Zm00001d013463_P001	Maize	golgi, plasma membrane, vacuole	39.32	52.49
CDX95800	Canola	endoplasmic reticulum	67.8	52.29
Solyc10g047300.1.1	Tomato	plastid	51.36	50.67
CDX92180	Canola	endoplasmic reticulum	67.29	49.75
HORVU4Hr1G006870.1	Barley	plastid	54.75	49.54
Solyc10g086170.1.1	Tomato	cytosol	33.22	46.01
Solyc10g007840.2.1	Tomato	plastid	16.1	17.96
Solyc01g106340.2.1	Tomato	cytosol, golgi, plasma membrane	16.95	16.39
Solyc01g106330.2.1	Tomato	cytosol	16.95	16.18
Solyc01g106360.2.1	Tomato	plastid	16.61	16.12
Solyc01g106350.2.1	Tomato	cytosol	16.1	15.83
Solyc06g068690.2.1	Tomato	extracellular	14.07	14.26
Solyc03g118030.2.1	Tomato	plastid	14.07	13.3
Solyc12g070080.1.1	Tomato	cytosol, plastid	3.22	12.75
Solyc12g070090.1.1	Tomato	cytosol	2.88	7.87

Protein Annotations

KEGG:00970+6.3.5.7	Gene3D:1.25.40.10	Gene3D:3.90.1300.10	MapMan:35.1	InterPro:AS_sf	InterPro:Amidase
InterPro:Amidase_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536
GO:GO:0009941	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0031359	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	InterPro:IPR036928	UniProt:K4BM18	PFAM:PF01425	PFAM:PF07719
PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR11895	PANTHER:PTHR11895:SF39	SMART:SM00028	SUPFAM:SSF48452
SUPFAM:SSF75304	EnsemblPlantsGene:Solyc03g118690.2	EnsemblPlants:Solyc03g118690.2.1	TMHMM:TMhelix	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_2	InterPro:TPR_repeat	UniParc:UPI0002765FBB	SEG:seg	:	:

Description

Outer envelope protein 64, chloroplastic [Source:Projected from Arabidopsis thaliana (AT3G17970) UniProtKB/Swiss-Prot;Acc:Q9LVH5]

Coordinates

chr3:+:67543799..67551645

Molecular Weight (calculated)

64113.6 Da

IEP (calculated)

9.097

GRAVY (calculated)

-0.217

Length

590 amino acids

Sequence
(BLAST)

001: MASQSANLWV LLGLGLAGIL LMTRKLKKAV KADFGAFVER LKLLPPPQPP PPKAPHPLTG LTFAISDVFD VNGFVTGFGN PDWSRTHEPA SQTSTVVTTL
101: VEGGATCTGR TVVDDMAFGI SGEQMHFDTP TNPAAPARMP GGSSSGAAVA VAAKFVDFSL GTDAVGGVRV PAAYCGVLGF RPSHGTVSHT GIIPVSASLD
201: TVGWFARDPS ILRRVGHVLL QVPFAAQRNP RNVVIADDCF QLLKSPGDRI SQAVTKAVEK LFGRQILRHE NLEAYLTSKV PSLKLFADRK SNGERKSSST
301: NLLAYAMHIL RRHEFKQNHL EWINAEKPNL DPFISSQMQG ALEITDTNID SCHAIRNEMR SALNDLLKDD GILVIPTVAE PPPKTGAKEI QSEDYQIRAC
401: SFSSIASMSG GCQVSVPAGF HDKCPISVSF VARQGGDRFL LDTIQTIYAD LQEQAELATK SSASGNALSK ETSAEMAKEK GNQAFKEKQW QRAIGFYTEA
501: IKLNGNSATY FSNRAAAHLE MRNFLQAEAD SSKAIDLDKK NVKAYLRRGT AREMLGYYKE AIEDFRYALV LEPTNKRASL SADRLKKLFP

Best Arabidopsis Sequence Match ( AT3G17970.1 )
(BLAST)

001: MASQAANLWV LLGLGLAGIL MLTKKLKKTV REDFGAFIDK LMLLPPPQPA PPKAPHPLTG LTFAVSDVFD ITGYVTGFGH PDWVRTHEAA SSTSPVVSTL
101: VEGGATCVGK TVVDEFAFSI SGENKHYDSP TNPAAPTRIP GGACSGAAVA VATNAVDFAL GIDTVGGVRV PAGYCGVLGF KSSYGAISNT GIIPVSSSLD
201: SVGWFARDPN TLRRVGHVLL QLPFATQRNP RQIILADDCF QLLKIPVDRI TQVVTKSAEK LFGRQLLKHQ NLETYFETKV PSLKEFARTK AIANTKVSTS
301: RLLANVMQLL QRHEFLQNHG DWINTVKPAI DPVILSQVCE NPELTNEETE NLNAIRNETR VAIGSLLKDD GILVIPTLPA VPPKLGSKEI TSEDYQNRAS
401: SLLSIASISG CCQVTVPLGH HEKCPISVSF IGRHGGDRFL LDTVQTMYPS LQEYSSIVTD PKSSKKAITK EESAEIAKEK GNQAFKEKLW QKAIGLYSEA
501: IKLSDNNATY YSNRAAAYLE LGGFLQAEED CTKAITLDKK NVKAYLRRGT AREMLGDCKG AIEDFRYALV LEPNNKRASL SAERLRKFQ

Arabidopsis Description

OEP64Outer envelope protein 64, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LVH5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.