CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022265.1-P	Field mustard	cytosol, mitochondrion	10.9	20.61
CDX92180	Canola	endoplasmic reticulum	14.42	5.64
CDX95800	Canola	endoplasmic reticulum	10.9	4.44
CDY21581	Canola	cytosol	0.0	0.0
Solyc12g070090.1.1	Tomato	cytosol	0.0	0.0
Solyc12g070080.1.1	Tomato	cytosol, plastid	0.0	0.0
Os04t0118400-01	Rice	extracellular	0.0	0.0
Os02t0519900-01	Rice	nucleus, plasma membrane, plastid	0.0	0.0
CDY59872	Canola	plastid	0.0	0.0
CDY58262	Canola	cytosol	0.0	0.0
CDY51926	Canola	endoplasmic reticulum	0.0	0.0
CDY46805	Canola	cytosol	0.0	0.0
CDY46509	Canola	cytosol	0.0	0.0
CDY40591	Canola	endoplasmic reticulum, golgi	0.0	0.0
CDY31318	Canola	cytosol	0.0	0.0
CDY22653	Canola	cytosol	0.0	0.0
CDY06342	Canola	cytosol	0.0	0.0
CDY04173	Canola	plastid	0.0	0.0
CDY03602	Canola	cytosol, plastid	0.0	0.0
CDX98979	Canola	plastid	0.0	0.0
CDX93679	Canola	mitochondrion	0.0	0.0
CDX84527	Canola	cytosol	0.0	0.0
CDX75952	Canola	endoplasmic reticulum	0.0	0.0
CDX70030	Canola	plastid	0.0	0.0
CDX69906	Canola	cytosol, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:CDX69905	EnsemblPlantsGene:GSBRNA2T00135978001	Gene3D:3.40.50.1820	GO:A0A078BYR7	GO:GO:0003674	GO:GO:0003824
InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:Epox_hydrolase-like	InterPro:IPR029058	PANTHER:PTHR43139	PANTHER:PTHR43139:SF10
PFAM:PF00561	PRINTS:PR00111	PRINTS:PR00412	ProteinID:CDX69905	ProteinID:CDX69905.1	SUPFAM:SSF53474
UniParc:UPI0004EE30AD	MapMan:35.2	:	:	:	:

Description

BnaA10g22540D

Coordinates

chrLK031790:-:2298246..2299501

Molecular Weight (calculated)

35818.6 Da

IEP (calculated)

8.279

GRAVY (calculated)

-0.103

Length

312 amino acids

Sequence
(BLAST)

001: MVDYLRLLRC FSFTASRDWL FRQSFANAGL RSVTTDLSHG DSIASTTSMH CWIPKSPNRS KPNLLLVHGF GANAMWQYGQ HLRSFTGRYN VYVPDLLFFG
101: LSSTSEPNRT ESFQARCLMR LMEAHGVHTM NIVGISYGGF VGYSLAAQFP EKVEKLVLCC AGVCLEEKDM EDGLFKVPNL EEATEILIPQ TPEKLKELIR
201: FSFVKPIRGV PSFFLWDFID VMCTEFVEEK RDLIKSILKD RRLSDLPRIR QKTLIIWGEE DQIFPLELGY RLKRYIGENA EMVVIKKAGH AVNLEKSKEF
301: LKHLKSFLID SL

Best Arabidopsis Sequence Match ( AT5G09430.1 )
(BLAST)

001: MFDHMKLLRC FSFTASRDWL FRQSFANAGL RSVTTDLSHG NSIASTAMHC WIPKSPNRSK PNLLLLHGFG ANAMWQYGEH LRAFTGRFNV YVPDLLFFGL
101: SSTSEPNRTE SFQARCLMRL MEAHGVQRMN IVGISYGGFV GYSLAAQFPE NVEKLVLCCA GVCLEEKDME DGLFKVPNLE EATGILIPQT PEKLKELIRF
201: SFVKPIKGVP SFFLWDFIDV MCTEFVEEKR DLIKSILKDR RLSDLPRIKQ KSLIIWGEED QIFPLELGYR LKRHIGESAE IVVIKKAGHA VNLEKSKEFV
301: KHLKSFLIDS L

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q4PSG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.