Factsheet for TraesCS2D01G039700.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
cytoskeleton 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, peroxisome
Any Predictor:	cytoskeleton, cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G041400.1	Wheat	plastid	95.29	96.55
TraesCS2B01G053800.1	Wheat	cytosol	95.13	96.22
TraesCS2D01G040000.1	Wheat	cytosol	92.37	95.47
TraesCS2D01G039600.2	Wheat	mitochondrion, nucleus, peroxisome	85.71	84.21
EES11732	Sorghum	cytosol, nucleus, plastid	78.9	78.64
TraesCS2D01G039900.1	Wheat	mitochondrion	73.21	74.3
Zm00001d024936_P002	Maize	mitochondrion	75.32	67.05
VIT_03s0097g00620.t01	Wine grape	cytosol, nucleus, plasma membrane	61.36	62.27
GSMUA_Achr4P18300_001	Banana	cytosol	39.94	61.81
KRH10653	Soybean	cytosol	59.42	60.3
KRH21697	Soybean	cytosol	58.93	59.8
Solyc01g106350.2.1	Tomato	cytosol	58.12	59.67
Solyc01g106360.2.1	Tomato	plastid	57.95	58.72
PGSC0003DMT400008086	Potato	cytosol, peroxisome, plastid	57.63	58.39
CDY46805	Canola	cytosol	55.68	56.14
CDY58262	Canola	cytosol	56.01	56.01
CDX84527	Canola	cytosol	56.01	56.01
AT5G64440.1	Thale cress	cytosol, nucleus, peroxisome	54.87	55.68
Bra031917.1-P	Field mustard	cytosol	55.03	55.3
CDY31318	Canola	cytosol	54.71	54.98
TraesCS1D01G421100.1	Wheat	golgi	42.21	42.62
TraesCS4D01G108100.1	Wheat	cytosol	40.42	41.16
TraesCS2D01G521500.1	Wheat	plastid	22.24	25.32
TraesCS5D01G083700.1	Wheat	cytosol	10.71	21.93
TraesCS2D01G573400.3	Wheat	cytosol, endoplasmic reticulum, peroxisome	13.96	19.86
TraesCS2D01G573300.1	Wheat	cytosol	14.45	19.82
TraesCS3D01G341200.1	Wheat	mitochondrion, vacuole	17.21	16.54
TraesCS4D01G040700.1	Wheat	endoplasmic reticulum	15.75	16.5
TraesCS6D01G298000.1	Wheat	plastid	16.23	16.42

Protein Annotations

EnsemblPlants:TraesCS2D01G039700.2	EnsemblPlantsGene:TraesCS2D01G039700	Gene3D:3.90.1300.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040
GO:GO:0016787	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_CS	InterPro:Amidase_dom	InterPro:IPR036928
KEGG:00970+6.3.5.7	ncoils:Coil	PANTHER:PTHR11895	PANTHER:PTHR11895:SF44	PFAM:PF01425	ScanProsite:PS00571
SEG:seg	SUPFAM:SSF75304	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr2D:+:14422766..14433516

Molecular Weight (calculated)

67669.8 Da

IEP (calculated)

7.085

GRAVY (calculated)

-0.053

Length

616 amino acids

Sequence
(BLAST)

001: MGGKVKAMAP VEEVDIAAAR YEPLVLRAPR LTGFPLRAFV WLLESPLLGP IVTSVLKKHN NMTQMLQHTV IPDRPMFFPE FPPQEPEQGV VTLGEDRDPV
101: ERVEEALQCL TPYDPSGRFT SSDEKNPFLY WKIRDFAHAY RSGITTPSAV AEHVIAGVEE WNNKKPPMPM LIYFDAHDLR KQADASTKRF EQGSPISVLD
201: GIFFAIKDDI DCFPYPSKSG TTFFDKIRPV EKDAVLVARL RKCGVIFIGK ANMHELGIGV TGNNPNYGTV RNPHSINRYT GASSSGPAAL VSSGLCSAAI
301: GTDAGGSVRI PSSLCGIIGL KTTFGRTNMT GVLCDCGTAE VASPLTASVE DSVLVYSALA GCRPMDKLTL RPLPLCVPNL VSSENNDILQ SVKVGKYTEW
401: FHDVSDIEIS NTCEDALSLL RNTFGCQIEE IILPELLEMR TAHLVTIGSE GFCQLNAHYQ EGRRTEMTLD TRGSLALFGS FTSADYVASQ RLRRRMMYYH
501: MEAFRKVDVI ATPTTGITAP RIPPSALKGE SDYIVSAKLM QFIVAGNFLG FPAITVPVGH DKQGLPIGLQ LIGRPWGEAS LLRVASAVEV PFTFIIKELC
601: LKRRNRPSTF YDILKA

Best Arabidopsis Sequence Match ( AT5G64440.1 )
(BLAST)

001: MGKYQVMKRA SEVDLSTVKY KAETMKAPHL TGLSFKLFVN LLEAPLIGSL IVDYLKKDNG MTKIFRNTVI PEEPMFRPEF PSQEPEHDVV IVGEDESPID
101: RLETALKCLP QYDPSRSLHA DPVSSFRYWK IRDYAYAYRS KLTTPLQVAK RIISIIEEFG YDKPPTPFLI RFDANEVIKQ AEASTRRFEQ GNPISVLDGI
201: FVTIKDDIDC LPHPTNGGTT WLHEDRSVEK DSAVVSKLRS CGAILLGKAN MHELGMGTTG NNSNYGTTRN PHDPKRYTGG SSSGSAAIVA AGLCSAALGT
301: DGGGSVRIPS ALCGITGLKT TYGRTDMTGS LCEGGTVEII GPLASSLEDA FLVYAAILGS SSADRYNLKP SPPCFPKLLS HNGSNAIGSL RLGKYTKWFN
401: DVSSSDISDK CEDILKLLSN NHGCKVVEIV VPELEEMRAA HVISIGSPTL SSLTPYCEAG KNSKLSYDTR TSFAIFRSFS ASDYIAAQCL RRRLMEYHLN
501: IFKDVDVIVT PTTGMTAPVI PPDALKNGET NIQVTTDLMR FVLAANLLGF PAISVPVGYD KEGLPIGLQI MGRPWAEATV LGLAAAVEEL APVTKKPAIF
601: YDILNTN

Arabidopsis Description

FAAHFatty acid amide hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q7XJJ7]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.