Factsheet for TraesCS2B01G549500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G521500.1	Wheat	plastid	98.52	98.52
TraesCS2A01G520300.1	Wheat	mitochondrion, plastid	96.86	96.86
HORVU2Hr1G115000.1	Barley	cytosol, plastid	94.08	91.38
EES11532	Sorghum	plastid	90.02	90.02
Zm00001d002104_P001	Maize	mitochondrion, plastid	89.46	88.64
Os04t0643200-00	Rice	plastid	82.07	83.15
Bra017354.1-P	Field mustard	cytosol, peroxisome, plastid	55.82	72.95
KRG98874	Soybean	mitochondrion	61.92	70.53
KRH46093	Soybean	mitochondrion	69.13	68.88
VIT_12s0028g01330.t01	Wine grape	mitochondrion	69.5	68.86
Solyc10g007840.2.1	Tomato	plastid	67.28	68.81
GSMUA_Achr9P09040_001	Banana	plastid	73.57	68.74
AT3G25660.1	Thale cress	plastid	66.73	67.23
CDY04173	Canola	plastid	66.17	66.54
CDY59872	Canola	plastid	65.99	66.36
Bra026512.1-P	Field mustard	cytosol	21.44	64.09
CDY46509	Canola	cytosol	21.44	64.09
PGSC0003DMT400054702	Potato	mitochondrion	49.54	52.34
PGSC0003DMT400054703	Potato	cytoskeleton, cytosol, nucleus, plastid	26.8	41.79
TraesCS1B01G443700.1	Wheat	golgi	26.62	23.61
TraesCS2B01G053700.1	Wheat	mitochondrion, nucleus, peroxisome	26.8	23.54
TraesCS2B01G624200.1	Wheat	cytosol	18.85	22.67
TraesCS2B01G053800.1	Wheat	cytosol	25.51	22.66
TraesCS2B01G603900.1	Wheat	cytosol	18.11	22.17
TraesCS3B01G379500.5	Wheat	golgi, vacuole	20.89	17.74
TraesCS6B01G349000.1	Wheat	plastid	18.3	16.26
TraesCS4B01G043200.1	Wheat	endoplasmic reticulum	17.01	15.7

Protein Annotations

KEGG:00970+6.3.5.7	MapMan:17.2.8.1	Gene3D:3.90.1300.10	InterPro:AS_sf	InterPro:Amidase	InterPro:Amidase_CS
InterPro:Amidase_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0030956	GO:GO:0050567	InterPro:GatA	InterPro:IPR036928
HAMAP:MF_00120	PFAM:PF01425	ScanProsite:PS00571	PANTHER:PTHR11895	PANTHER:PTHR11895:SF141	SUPFAM:SSF75304
TIGRFAMs:TIGR00132	EnsemblPlantsGene:TraesCS2B01G549500	EnsemblPlants:TraesCS2B01G549500.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr2B:+:745714123..745717961

Molecular Weight (calculated)

56834.5 Da

IEP (calculated)

5.917

GRAVY (calculated)

-0.029

Length

541 amino acids

Sequence
(BLAST)

001: MPPPLQAHRI LLSHRRASPI PRRRFTAVSS LSSAPAKTVA PGPPASSILS IRESLLSGER TAADITSEYL SRLRRTEPSL RSFIHVADAA AEREAEELDR
101: RIASGGKDAV GPLAGVLVGV KDNLCTASMP STGGSRILDG FQPAYDATAV RRLREAGAIV VGKTNLDEFG MGSTTEGSGF QVTTNPWDDS RVPGGSSGGS
201: ASAVSARQCV VSLGSDTGGS VRQPASFCGV VGLKPTYGRV SRFGLMAYAS SLDVVGCFGS SVFDTATILS VIAGHDKMDS TSSSHDVPDY RSDLASLSLL
301: ESKPLNNVRI GIIQETLGEG VDAGVVSSIR SAASHLEQLG SVVEEVSMPS FSLGLPAYYI LASSEASSNL SRYDGIRYGQ QVSADDLNEM YGDSRANGLG
401: HEVKMRILMG TYALSAGYYD AYYKRAQQVR TLVKKSFEEA LGKYDILISP AAPSAAYKIG EKTNDPLAMY AGDIMTVNVN MAGLPALVVP CGFVEGGSAG
501: LPVGLQMIGS PFSEGSLLRV GHIFEQTLQD LSFVPPLLAD G

Best Arabidopsis Sequence Match ( AT3G25660.1 )
(BLAST)

001: MLSTLQPPRS LSLLPLRRFQ ISKTIVSAAS SKTIDTSVIS PPQSQILTTR RSLLSGETTA VEIAKSYLSR IRLTEPQLKC FLHVSENVLK DAQEIDQRIA
101: KGEELGPLAG VLIGVKDNIC TQGMPSTAAS RILEHYRPPF DATAVKKIKE LGGIVVGKTN MDEFGMGSTT EASAFQVTAN PWDLSRVPGG SSGGSAAAVA
201: ARQCMVSLGS DTGGSVRQPA SFCGVVGLKP TYGRVSRFGL MAYASSLDVI GCFGSTVADA GMLLHAISGY DRFDSTSSKQ DVPEFQSQFL SVDHFESKPL
301: NGVKVGIIRE TLEDGVDSGV RSATQEAASH LEALGCILTE VSLPSFSLGL PAYYVIASSE SSSNLSRYDG VRYGNQVMAE ELNKLYECSR GEGFGGEVKM
401: RILMGTYALS AGYYDAYYKR AQQVRTLIRK DFKAALEQND ILISPAAPSA AYKIGEKKDD PLAMYAGDIM TVNVNLAGLP AMVLPCGLVE GGPSGLPVGL
501: QMIGAAFDEE KLLKVGHIFE QTLKGSSFVP PLLANVA

Arabidopsis Description

GATAGlutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.