Factsheet for HORVU2Hr1G115000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G520300.1	Wheat	mitochondrion, plastid	91.38	94.08
TraesCS2B01G549500.1	Wheat	mitochondrion, plastid	91.38	94.08
TraesCS2D01G521500.1	Wheat	plastid	91.38	94.08
EES11532	Sorghum	plastid	85.1	87.62
Zm00001d002104_P001	Maize	mitochondrion, plastid	83.84	85.53
Os04t0643200-00	Rice	plastid	77.38	80.71
GSMUA_Achr9P09040_001	Banana	plastid	69.66	67.01
HORVU5Hr1G093800.2	Barley	mitochondrion, plastid	43.99	66.58
HORVU6Hr1G060680.1	Barley	cytosol	6.82	23.9
HORVU4Hr1G019600.11	Barley	cytosol	25.49	23.47
HORVU1Hr1G090770.2	Barley	endoplasmic reticulum, golgi, plasma membrane	25.49	23.32
HORVU3Hr1G088210.5	Barley	endoplasmic reticulum, golgi	20.11	16.84
HORVU2Hr1G126540.1	Barley	cytosol	8.62	14.12
HORVU4Hr1G006870.1	Barley	plastid	16.16	13.8
HORVU6Hr1G078210.1	Barley	mitochondrion	12.75	12.72

Protein Annotations

KEGG:00970+6.3.5.7	MapMan:17.2.8.1	Gene3D:3.90.1300.10	UniProt:A0A287JJ40	InterPro:AS_sf	InterPro:Amidase
InterPro:Amidase_CS	InterPro:Amidase_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004040
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006139	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016787	GO:GO:0016874
GO:GO:0016884	GO:GO:0019538	GO:GO:0030956	GO:GO:0032543	GO:GO:0050567	GO:GO:0070681
InterPro:GatA	EnsemblPlantsGene:HORVU2Hr1G115000	EnsemblPlants:HORVU2Hr1G115000.1	InterPro:IPR036928	HAMAP:MF_00120	PFAM:PF01425
ScanProsite:PS00571	PANTHER:PTHR11895	PANTHER:PTHR11895:SF141	SUPFAM:SSF75304	TIGRFAMs:TIGR00132	UniParc:UPI000B486293
SEG:seg	:	:	:	:	:

Description

Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial [Source:UniProtKB/TrEMBL;Acc:A0A287JJ40]

Coordinates

chrchr2H:-:733502458..733506799

Molecular Weight (calculated)

54864.0 Da

IEP (calculated)

5.198

GRAVY (calculated)

-0.026

Length

557 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXPIPRRR FTAVSSLSSP PAKTLAPGPT PSSILSIRES LLSGERTAAD ITSEYLSRLR RTEPSLRSFI
101: HVADAAAERE AEELDRRIAS GGQDAVGPLA GVLVGVKDNL CTASMPSTGG SRILDGFQPA YDATAVRRLR EAGAIVVGKT NLDEFGMGST TEGSGFQVTT
201: NPWDDSRVPG GSSGGSASAV SARQCVVSLG SDTGGSVRQP ASFCGVVGLK PTYGRVSRFG LMAYASSLDV VGCFGSSVFD TATILSVIAG HDKMDSTSSS
301: HDVPDYRSDL ASLSLLESKP LNNVRIGIIQ ETLGEGVDAG VISSIRAAAS HLEQLGSVVE EVSMPSFSLG LPAYYILASS EASSNLSRYD GIRYGRQVSA
401: DDLNELYGNS RASGLGHEVK MRILMGTYAL SAGYYDAYYK RAQQVRTLVK KSFEEALGKY DILISPAAPS AAYKIGEKTN DPLAMYAGDI MTVNVNMAGL
501: PALVVPCGFV EGGSAGLPVG LQMIGSPFSE GNLLRVGHIF EQTLQDLSFV PPLAADN

Best Arabidopsis Sequence Match ( AT3G25660.1 )
(BLAST)

001: MLSTLQPPRS LSLLPLRRFQ ISKTIVSAAS SKTIDTSVIS PPQSQILTTR RSLLSGETTA VEIAKSYLSR IRLTEPQLKC FLHVSENVLK DAQEIDQRIA
101: KGEELGPLAG VLIGVKDNIC TQGMPSTAAS RILEHYRPPF DATAVKKIKE LGGIVVGKTN MDEFGMGSTT EASAFQVTAN PWDLSRVPGG SSGGSAAAVA
201: ARQCMVSLGS DTGGSVRQPA SFCGVVGLKP TYGRVSRFGL MAYASSLDVI GCFGSTVADA GMLLHAISGY DRFDSTSSKQ DVPEFQSQFL SVDHFESKPL
301: NGVKVGIIRE TLEDGVDSGV RSATQEAASH LEALGCILTE VSLPSFSLGL PAYYVIASSE SSSNLSRYDG VRYGNQVMAE ELNKLYECSR GEGFGGEVKM
401: RILMGTYALS AGYYDAYYKR AQQVRTLIRK DFKAALEQND ILISPAAPSA AYKIGEKKDD PLAMYAGDIM TVNVNLAGLP AMVLPCGLVE GGPSGLPVGL
501: QMIGAAFDEE KLLKVGHIFE QTLKGSSFVP PLLANVA

Arabidopsis Description

GATAGlutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.