Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400029618 | Potato | cytosol | 51.71 | 62.71 |
| GSMUA_Achr1P12120_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 40.55 | 62.68 |
| VIT_07s0104g01740.t01 | Wine grape | cytosol | 61.28 | 59.51 |
| KRH68152 | Soybean | mitochondrion | 68.11 | 59.21 |
| Solyc09g074830.2.1 | Tomato | plastid | 59.91 | 51.57 |
| Bra032577.1-P | Field mustard | cytosol | 53.08 | 51.21 |
| CDY37453 | Canola | cytosol | 53.99 | 48.87 |
| AT1G02970.1 | Thale cress | cytosol, mitochondrion | 55.35 | 48.6 |
| CDY32487 | Canola | cytosol | 53.3 | 48.25 |
| Os02t0135300-00 | Rice | cytosol | 51.71 | 43.65 |
| HORVU6Hr1G018060.2 | Barley | cytosol | 47.61 | 43.63 |
| KXG29416 | Sorghum | mitochondrion | 50.57 | 41.26 |
| TraesCS6A01G099900.1 | Wheat | mitochondrion | 48.06 | 40.73 |
| Zm00001d053998_P001 | Maize | mitochondrion | 49.89 | 40.71 |
| TraesCS6B01G128100.1 | Wheat | mitochondrion | 47.61 | 40.66 |
| TraesCS6D01G082400.1 | Wheat | mitochondrion | 47.38 | 40.39 |
| CDY01309 | Canola | nucleus | 23.46 | 37.05 |
| CDX86692 | Canola | nucleus | 53.99 | 25.87 |
| GSMUA_Achr1P12130_001 | Banana | mitochondrion | 12.76 | 22.49 |
Protein Annotations
| Gene3D:1.10.510.10 | EntrezGene:100784055 | MapMan:13.1.2.5 | MapMan:18.4.21 | Gene3D:3.30.200.20 | EMBL:ACUP02007881 |
| EnsemblPlantsGene:GLYMA_13G025500 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | UniProt:I1LXV3 | InterPro:IPR000719 |
| EnsemblPlants:KRH17892 | ProteinID:KRH17892 | ProteinID:KRH17892.1 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 |
| ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR11042 | PANTHER:PTHR11042:SF128 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS |
| SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI00023CFA76 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr13:+:5155299..5158891
Molecular Weight (calculated)
49001.4 Da
IEP (calculated)
5.053
GRAVY (calculated)
-0.372
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRKMQNEKQ DLDLVISSSS LDDDIDFILS QDLFCTPDYL TPDNKFPVKG FDSNSVDLEE EDGPCPKSPE KKPSTSKGKR CRMDDAISGD TLSSTSSGDN
101: QPIVELGNDF VGEYITDKPK ARNYVSRSAV ALRCRVMPPP CIRNPFLKCL SEKEIDPFES QRSKFAGLFP ALVGGGGGGD CLSRYRNDFH EIEQIGIGHF
201: SNVFKVIKRI DGCLYAVKHS TRKLCKETER EKALMEVQAL AAIGSHENIV GYYSSWFENE QLYIQMELCD HSLSIKNCPS LVTAGHEIEA LYQVASALQF
301: IHKKGIAHLD VKPENIYVKN GVYKLGDFGC ATLLDNSLPI EEGDAHYMPQ EILNENYDHL DKVDIFSLGA SMFELISSSC LPEPESGIQF FNPKEGKVPF
401: LPGVSVQFQN LLTVMMDPDP VKRPSATKLL KRVLEMARN
101: QPIVELGNDF VGEYITDKPK ARNYVSRSAV ALRCRVMPPP CIRNPFLKCL SEKEIDPFES QRSKFAGLFP ALVGGGGGGD CLSRYRNDFH EIEQIGIGHF
201: SNVFKVIKRI DGCLYAVKHS TRKLCKETER EKALMEVQAL AAIGSHENIV GYYSSWFENE QLYIQMELCD HSLSIKNCPS LVTAGHEIEA LYQVASALQF
301: IHKKGIAHLD VKPENIYVKN GVYKLGDFGC ATLLDNSLPI EEGDAHYMPQ EILNENYDHL DKVDIFSLGA SMFELISSSC LPEPESGIQF FNPKEGKVPF
401: LPGVSVQFQN LLTVMMDPDP VKRPSATKLL KRVLEMARN
001: MFEKNGRTLL AKRKTQGTIK TRASKKIRKM EGTLERHSLL QFGQLSKISF ENRPSSNVAS SAFQGLLDSD SSELRNQLGS ADSDANCGEK DFILSQDFFC
101: TPDYITPDNQ NLMSGLDISK DHSPCPRSPV KLNTVKSKRC RQESFTGNHS NSTWSSKHRV DEQENDDIDT DEVMGDKLQA NQTERTGYVS QAAVALRCRA
201: MPPPCLKNPY VLNQSETATD PFGHQRSKCA SFLPVSTSGD GLSRYLTDFH EIRQIGAGHF SRVFKVLKRM DGCLYAVKHS TRKLYLDSER RKAMMEVQAL
301: AALGFHENIV GYYSSWFENE QLYIQLELCD HSLSALPKKS SLKVSEREIL VIMHQIAKAL HFVHEKGIAH LDVKPDNIYI KNGVCKLGDF GCATRLDKSL
401: PVEEGDARYM PQEILNEDYE HLDKVDIFSL GVTVYELIKG SPLTESRNQS LNIKEGKLPL LPGHSLQLQQ LLKTMMDRDP KRRPSARELL DHPMFDRIRG
101: TPDYITPDNQ NLMSGLDISK DHSPCPRSPV KLNTVKSKRC RQESFTGNHS NSTWSSKHRV DEQENDDIDT DEVMGDKLQA NQTERTGYVS QAAVALRCRA
201: MPPPCLKNPY VLNQSETATD PFGHQRSKCA SFLPVSTSGD GLSRYLTDFH EIRQIGAGHF SRVFKVLKRM DGCLYAVKHS TRKLYLDSER RKAMMEVQAL
301: AALGFHENIV GYYSSWFENE QLYIQLELCD HSLSALPKKS SLKVSEREIL VIMHQIAKAL HFVHEKGIAH LDVKPDNIYI KNGVCKLGDF GCATRLDKSL
401: PVEEGDARYM PQEILNEDYE HLDKVDIFSL GVTVYELIKG SPLTESRNQS LNIKEGKLPL LPGHSLQLQQ LLKTMMDRDP KRRPSARELL DHPMFDRIRG
Arabidopsis Description
WEE1Wee1-like protein kinase [Source:UniProtKB/Swiss-Prot;Acc:Q8L4H0]
SUBAcon: [cytosol,mitochondrion]
SUBAcon: [cytosol,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.