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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
 nucleus: 24385303
msms PMID: 24385303 doi
S Komatsu, S Hiraga, MZ Nouri
National Institute of Crop Science, National Agriculture and Food Research Organization, Kannondai 2-1-18, Tsukuba, 305-8518, Japan, skomatsu@affrc.go.jp.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH56361 Soybean plastid 84.97 82.83
PGSC0003DMT400028031 Potato extracellular 60.1 59.18
PGSC0003DMT400055550 Potato extracellular 54.92 55.21
Solyc06g034370.1.1 Tomato extracellular 52.85 53.12
VIT_16s0022g00960.t01 Wine grape extracellular, vacuole 53.89 52.53
CDX92687 Canola extracellular 48.7 46.77
Bra019179.1-P Field mustard extracellular 48.19 46.27
Bra013881.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 48.19 46.04
KRH77402 Soybean extracellular 48.19 45.81
AT4G25260.1 Thale cress endoplasmic reticulum, extracellular 47.67 45.77
CDX89429 Canola extracellular 47.67 45.77
CDY11066 Canola extracellular 47.67 45.77
AT5G62350.1 Thale cress extracellular 47.15 45.05
CDX94463 Canola extracellular 46.63 44.78
CDY00278 Canola extracellular 47.15 44.61
CDX86904 Canola extracellular 47.15 44.61
Bra010075.1-P Field mustard extracellular 47.15 44.61
KRH04067 Soybean extracellular 49.22 44.6
Bra018157.1-P Field mustard plastid 41.97 43.78
CDY30715 Canola endoplasmic reticulum, extracellular 45.08 43.28
Bra029267.1-P Field mustard endoplasmic reticulum, extracellular 44.56 42.79
KRH57338 Soybean endoplasmic reticulum, extracellular 47.15 42.33
CDY70789 Canola extracellular 44.04 42.08
CDX99059 Canola extracellular 44.04 42.08
GSMUA_Achr11P... Banana extracellular 35.75 41.32
AT3G47380.1 Thale cress extracellular 43.01 41.09
KRH39988 Soybean endoplasmic reticulum, extracellular 43.01 40.1
GSMUA_Achr8P12460_001 Banana extracellular 35.23 40.0
GSMUA_Achr3P26730_001 Banana extracellular 34.72 38.73
GSMUA_Achr1P00870_001 Banana extracellular 33.68 38.69
KRH76196 Soybean endoplasmic reticulum, plasma membrane 42.49 38.32
KRH65345 Soybean endoplasmic reticulum, vacuole 43.01 37.9
GSMUA_Achr5P12890_001 Banana endoplasmic reticulum 34.72 36.81
KRH23798 Soybean plastid 38.34 36.63
TraesCS7D01G400200.1 Wheat extracellular, golgi 37.82 35.78
TraesCS7B01G306500.1 Wheat extracellular, golgi 37.82 35.78
Os06t0711800-01 Rice extracellular 36.79 35.5
KRH65346 Soybean endoplasmic reticulum, extracellular 39.9 35.32
TraesCS7A01G406500.1 Wheat extracellular, golgi 37.31 35.12
HORVU7Hr1G095080.4 Barley mitochondrion, plastid 36.79 34.8
KXG20844 Sorghum extracellular 34.72 33.17
KRH41681 Soybean extracellular 36.27 32.71
KRH37544 Soybean endoplasmic reticulum, extracellular 36.27 32.71
KRH12602 Soybean extracellular 35.75 31.94
KXG20845 Sorghum extracellular 35.75 31.8
Zm00001d014757_P001 Maize extracellular, vacuole 35.23 31.78
KRH60383 Soybean extracellular 35.23 31.78
Os04t0106000-01 Rice extracellular 29.02 31.64
KRH02570 Soybean extracellular 33.16 31.22
Zm00001d036431_P001 Maize extracellular 34.2 29.86
Zm00001d024913_P001 Maize extracellular 31.09 29.56
KRH76197 Soybean endoplasmic reticulum, extracellular 23.32 29.22
KRH68192 Soybean extracellular 29.53 28.93
EES11737 Sorghum extracellular 31.61 28.5
KRH38255 Soybean extracellular 30.05 27.88
TraesCS2A01G036100.1 Wheat extracellular 30.57 27.83
TraesCS2D01G035100.1 Wheat extracellular 30.05 27.23
KRH56360 Soybean extracellular 31.09 26.09
TraesCS2B01G049000.1 Wheat extracellular 28.5 25.82
KRH62604 Soybean endoplasmic reticulum, extracellular 30.05 25.44
KRH23797 Soybean plastid 27.98 25.23
KRH39989 Soybean mitochondrion 26.94 24.76
Protein Annotations
Gene3D:1.20.140.40EntrezGene:100305900MapMan:35.1EMBL:ACUP02002323EMBL:BT089730UniProt:C6SX36
EnsemblPlantsGene:GLYMA_04G118700GO:GO:0003674GO:GO:0004857GO:GO:0008150GO:GO:0030234GO:GO:0043086
InterPro:IPR035513InterPro:Invertase/methylesterase_inhibEnsemblPlants:KRH62602ProteinID:KRH62602ProteinID:KRH62602.1PFAM:PF04043
PANTHER:PTHR31080PANTHER:PTHR31080:SF31InterPro:Pectinesterase_inhib_domSMART:SM00856SUPFAM:SSF101148SignalP:SignalP-noTM
TIGRFAMs:TIGR01614TMHMM:TMhelixUniParc:UPI000189DA4ASEG:seg::
Description
hypothetical protein
Coordinates
chr4:+:14122926..14124014
Molecular Weight (calculated)
21202.3 Da
IEP (calculated)
8.057
GRAVY (calculated)
-0.047
Length
193 amino acids
Sequence
(BLAST)
001: MTTISNCSLL FLFLFLSTLH IASTLSTPTN FIKSSCSTTQ YPALCIQSLS VYASTIQQDP HELVQTALSL SLNHTEATKT FVAKCNKFRG LKPREYAALK
101: DCAEEISDSV DRLSRSLKEL KLCKVKGEDF TWHISNVETW VSSALTDEST CGDGFAGKAL NGKIKEAIRA RMVNVAQVTS NALSLINQYA AQH
Best Arabidopsis Sequence Match ( AT5G62350.1 )
(BLAST)
001: MAKQYLFVLL SISYLLSLEL TAATAASQTG ASKKAINFIQ SSCKTTTYPA LCVHSLSVYA NDIQTSPKRL AETAIAVTLS RAQSTKLFVS RLTRMKGLKK
101: REVEAIKDCV EEMNDTVDRL TKSVQELKLC GSAKDQDQFA YHMSNAQTWT SAALTDENTC SDGFSGRVMD GRIKNSVRAR IMNVGHETSN ALSLINAFAK
201: TY
Arabidopsis Description
Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LVA4]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.