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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • cytosol 2
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
TargetP:plastid
YLoc:cytosol
 extracellular: 19038476
msms PMID: 19038476 doi
XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim
Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d024913_P001 Maize extracellular 64.41 56.16
TraesCS2A01G036100.1 Wheat extracellular 64.41 53.77
EES11737 Sorghum extracellular 64.97 53.74
TraesCS2B01G049000.1 Wheat extracellular 64.41 53.52
TraesCS2D01G035100.1 Wheat extracellular 63.84 53.05
GSMUA_Achr11P... Banana extracellular 46.33 49.1
GSMUA_Achr1P00870_001 Banana extracellular 44.63 47.02
GSMUA_Achr8P12460_001 Banana extracellular 42.37 44.12
GSMUA_Achr5P12890_001 Banana endoplasmic reticulum 42.94 41.76
Os06t0711800-01 Rice extracellular 45.76 40.5
PGSC0003DMT400032573 Potato cytosol 24.86 40.0
PGSC0003DMT400012073 Potato plastid 38.42 37.16
KRH77402 Soybean extracellular 40.68 35.47
CDY65618 Canola extracellular 40.68 34.95
VIT_00s0323g00050.t01 Wine grape extracellular 38.42 34.17
AT4G12390.1 Thale cress endoplasmic reticulum, plasma membrane 39.55 33.98
Bra018475.1-P Field mustard endoplasmic reticulum, plasma membrane 39.55 33.98
Bra029450.1-P Field mustard endoplasmic reticulum, extracellular 38.98 33.82
CDX86708 Canola endoplasmic reticulum, vacuole 38.98 33.82
CDY52309 Canola endoplasmic reticulum, vacuole 38.98 33.82
CDX97343 Canola endoplasmic reticulum, plasma membrane 38.98 33.5
PGSC0003DMT400055550 Potato extracellular 36.16 33.33
Solyc06g034370.1.1 Tomato extracellular 35.59 32.81
Bra018157.1-P Field mustard plastid 33.9 32.43
KRH57338 Soybean endoplasmic reticulum, extracellular 38.42 31.63
KRH04067 Soybean extracellular 37.85 31.46
VIT_16s0022g00960.t01 Wine grape extracellular, vacuole 35.03 31.31
Solyc08g007450.1.1 Tomato extracellular 35.59 31.19
CDY34685 Canola extracellular 36.16 31.07
CDX89429 Canola extracellular 35.03 30.85
Bra013881.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 35.03 30.69
CDY31841 Canola endoplasmic reticulum, extracellular 35.03 30.54
CDY46921 Canola endoplasmic reticulum, extracellular 35.03 30.54
Bra027019.1-P Field mustard endoplasmic reticulum, extracellular 35.03 30.54
CDX94463 Canola extracellular 34.46 30.35
CDY30715 Canola endoplasmic reticulum, extracellular 34.46 30.35
Bra029267.1-P Field mustard endoplasmic reticulum, extracellular 34.46 30.35
AT3G47380.1 Thale cress extracellular 34.46 30.2
Bra010075.1-P Field mustard extracellular 34.46 29.9
CDX86904 Canola extracellular 34.46 29.9
CDY00278 Canola extracellular 34.46 29.9
CDY70789 Canola extracellular 33.9 29.7
CDX99059 Canola extracellular 33.9 29.7
CDY11066 Canola extracellular 33.33 29.35
Bra019179.1-P Field mustard extracellular 33.33 29.35
CDX92687 Canola extracellular 33.33 29.35
PGSC0003DMT400028031 Potato extracellular 32.2 29.08
KRH62602 Soybean nucleus 31.64 29.02
AT1G62770.1 Thale cress endoplasmic reticulum, extracellular, vacuole 33.33 28.92
AT4G25260.1 Thale cress endoplasmic reticulum, extracellular 32.2 28.36
KRH56361 Soybean plastid 31.64 28.28
AT5G62350.1 Thale cress extracellular 32.2 28.22
PGSC0003DMT400003231 Potato mitochondrion 24.86 27.33
Os10t0185400-00 Rice extracellular 35.03 27.31
Os10t0508700-01 Rice extracellular 32.77 27.1
Solyc01g091100.2.1 Tomato extracellular 31.07 26.7
PGSC0003DMT400066783 Potato extracellular 31.07 26.7
Solyc01g091110.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 31.64 26.17
Solyc10g018320.1.1 Tomato extracellular 29.94 25.73
KRH65345 Soybean endoplasmic reticulum, vacuole 31.07 25.11
AT4G00080.1 Thale cress endoplasmic reticulum, extracellular, vacuole 29.38 24.88
KRH76196 Soybean endoplasmic reticulum, plasma membrane 29.94 24.77
KRH65346 Soybean endoplasmic reticulum, extracellular 29.94 24.31
CDY63067 Canola extracellular 28.81 24.17
Bra037313.1-P Field mustard extracellular 28.81 24.17
Solyc10g018330.1.1 Tomato endoplasmic reticulum, extracellular 29.94 23.77
CDX83212 Canola endoplasmic reticulum, extracellular 27.68 23.67
CDY21496 Canola endoplasmic reticulum, extracellular 27.68 23.67
Bra000562.1-P Field mustard endoplasmic reticulum, extracellular 27.68 23.67
Os10t0186200-00 Rice plasma membrane, plastid 28.81 20.99
KRH76197 Soybean endoplasmic reticulum, extracellular 14.69 16.88
Protein Annotations
EnsemblPlants:Os04t0106000-01EnsemblPlantsGene:Os04g0106000Gene3D:1.20.140.40GO:GO:0003674GO:GO:0004857GO:GO:0008150
GO:GO:0030234GO:GO:0043086InterPro:IPR035513InterPro:Invertase/methylesterase_inhibInterPro:Pectinesterase_inhib_domPANTHER:PTHR31080
PANTHER:PTHR31080:SF60PFAM:PF04043ProteinID:BAF13926.1ProteinID:BAS87539.1SEG:segSMART:SM00856
SUPFAM:SSF101148TIGRFAMs:TIGR01614UniParc:UPI0000DD8F08UniProt:Q0JFG1MapMan:35.1:
Description
Pectinesterase inhibitor domain containing protein. (Os04t0106000-01)
Coordinates
chr4:-:386221..386877
Molecular Weight (calculated)
18344.5 Da
IEP (calculated)
10.183
GRAVY (calculated)
-0.312
Length
177 amino acids
Sequence
(BLAST)
001: SPAAAADFVR RSCRATRYPQ VCERSLMPQA PAVGRSPRLL AQAALTVGAD RARSCSGYLG GGGSSSSSKR SGGGGRGGAV GDCADTLRDA EERLRQSAAE
101: MSRMGRSGSP RFAWRLSNVQ TWASAALTDA STCLDSLATY AAPGIDVDAL RKRVGAVSQA TSNALALVNN LDPHHHL
Best Arabidopsis Sequence Match ( AT4G12390.1 )
(BLAST)
001: MEPKLTHLCY CLLLFLPLLC QSTIAKPSSS PNPSSSINFI VSSCRVTRYQ TLCVKCLAAF ADKIRRNENQ LAQTALAVTL VRVQSTTIYV GKLTKARRIK
101: RREYLAVKDC VENLGDGLEM LAQSMRELKQ VGRSGRDRDE FLWRLSNVET WVSAALTDET TCLDGFDGKV MDGVVKSAIR RRVVHVARVT SNALALVNRF
201: AARHKS
Arabidopsis Description
PME1Pectin methylesterase inhibitor 1 [Source:UniProtKB/TrEMBL;Acc:Q9STH2]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.