Factsheet for Bra018475.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 7
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97343	Canola	endoplasmic reticulum, plasma membrane	98.06	98.06
Bra029450.1-P	Field mustard	endoplasmic reticulum, extracellular	86.41	87.25
AT4G12390.1	Thale cress	endoplasmic reticulum, plasma membrane	86.89	86.89
Bra027019.1-P	Field mustard	endoplasmic reticulum, extracellular	51.46	52.22
KRH77402	Soybean	extracellular	50.0	50.74
VIT_00s0323g00050.t01	Wine grape	extracellular	47.57	49.25
PGSC0003DMT400012073	Potato	plastid	42.72	48.09
PGSC0003DMT400032573	Potato	cytosol	25.24	47.27
GSMUA_Achr11P...	Banana	extracellular	37.86	46.71
GSMUA_Achr8P12460_001	Banana	extracellular	36.89	44.71
GSMUA_Achr1P00870_001	Banana	extracellular	36.41	44.64
Bra013881.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	42.23	43.07
Bra019179.1-P	Field mustard	extracellular	41.75	42.79
KRH04067	Soybean	extracellular	43.2	41.78
Bra010075.1-P	Field mustard	extracellular	41.26	41.67
GSMUA_Achr3P26730_001	Banana	extracellular	34.95	41.62
Bra029267.1-P	Field mustard	endoplasmic reticulum, extracellular	39.81	40.8
Solyc08g007450.1.1	Tomato	extracellular	39.81	40.59
Os04t0106000-01	Rice	extracellular	33.98	39.55
KRH57338	Soybean	endoplasmic reticulum, extracellular	41.26	39.53
Bra018157.1-P	Field mustard	plastid	34.95	38.92
Bra006573.1-P	Field mustard	cytosol	18.45	38.78
Bra027020.1-P	Field mustard	endoplasmic reticulum, extracellular	37.86	38.24
Bra010076.1-P	Field mustard	endoplasmic reticulum, extracellular	35.92	37.37
Bra035897.1-P	Field mustard	plastid	35.92	37.19
KXG20844	Sorghum	extracellular	36.41	37.13
GSMUA_Achr5P12890_001	Banana	endoplasmic reticulum	32.52	36.81
Os06t0711800-01	Rice	extracellular	35.44	36.5
TraesCS7D01G400200.1	Wheat	extracellular, golgi	35.92	36.27
Zm00001d024913_P001	Maize	extracellular	35.44	35.96
TraesCS7B01G306500.1	Wheat	extracellular, golgi	35.44	35.78
TraesCS7A01G406500.1	Wheat	extracellular, golgi	35.44	35.61
HORVU7Hr1G095080.4	Barley	mitochondrion, plastid	34.95	35.29
Zm00001d014757_P001	Maize	extracellular, vacuole	36.41	35.05
Zm00001d036431_P001	Maize	extracellular	37.38	34.84
Bra016678.1-P	Field mustard	endoplasmic reticulum, extracellular	33.98	34.83
Bra026180.1-P	Field mustard	endoplasmic reticulum, extracellular	33.98	34.83
EES11737	Sorghum	extracellular	35.92	34.58
KXG20845	Sorghum	extracellular	35.92	34.1
TraesCS2A01G036100.1	Wheat	extracellular	34.95	33.96
TraesCS2D01G035100.1	Wheat	extracellular	34.95	33.8
Bra007939.1-P	Field mustard	extracellular	32.52	33.33
TraesCS2B01G049000.1	Wheat	extracellular	34.47	33.33
Bra002328.1-P	Field mustard	extracellular	32.04	32.51
Bra012366.1-P	Field mustard	endoplasmic reticulum, vacuole	32.52	32.06
Bra013878.1-P	Field mustard	plastid	23.3	32.0
Bra028261.1-P	Field mustard	cytosol, plastid	26.21	31.95
Bra026646.1-P	Field mustard	endoplasmic reticulum, vacuole	31.07	30.92
Bra003945.1-P	Field mustard	extracellular	31.55	30.81
Bra000562.1-P	Field mustard	endoplasmic reticulum, extracellular	30.58	30.43
Bra017437.1-P	Field mustard	endoplasmic reticulum, vacuole	29.61	29.9
Bra037313.1-P	Field mustard	extracellular	30.58	29.86
Bra019180.1-P	Field mustard	extracellular	28.64	29.65
Bra013879.1-P	Field mustard	plastid	21.36	29.33
Bra007704.1-P	Field mustard	extracellular, plastid	26.7	29.1
Bra004439.1-P	Field mustard	extracellular, vacuole	28.64	28.64
Bra024570.1-P	Field mustard	extracellular, vacuole	30.58	28.64
Bra021439.1-P	Field mustard	extracellular, plastid	26.7	27.09
Bra024869.1-P	Field mustard	endoplasmic reticulum, extracellular	27.18	26.42

Protein Annotations

EnsemblPlants:Bra018475.1	EnsemblPlants:Bra018475.1-P	EnsemblPlantsGene:Bra018475	Gene3D:1.20.140.40	GO:GO:0003674	GO:GO:0004857
GO:GO:0008150	GO:GO:0030234	GO:GO:0043086	InterPro:IPR035513	InterPro:Invertase/methylesterase_inhib	InterPro:Pectinesterase_inhib_dom
PANTHER:PTHR31080	PANTHER:PTHR31080:SF30	PFAM:PF04043	SEG:seg	SignalP:SignalP-noTM	SMART:SM00856
SUPFAM:SSF101148	TIGRFAMs:TIGR01614	UniParc:UPI0002548029	UniProt:M4DPN4	MapMan:35.1	:

Description

AT4G12390 (E=1e-075) PME1 | PME1 (PECTIN METHYLESTERASE INHIBITOR 1); enzyme inhibitor/ pectinesterase/ pectinesterase inhibitor

Coordinates

chrA05:+:8425594..8426214

Molecular Weight (calculated)

23055.3 Da

IEP (calculated)

10.775

GRAVY (calculated)

-0.096

Length

206 amino acids

Sequence
(BLAST)

001: MEPKLTHLCY CLLVFLPLLS QSAIANPSSS PNHSNNINFI VSSCRTTRYP TLCVKCLAAF ASKIRCNENR LAQTGLAVTL VRVRSTTAYL AKLTKARRVK
101: RREYLAVKDC VENLGDGLTM LAQSMREMKR VGRSGRGREE FLWRLSNVET WVSAALTDET TCLDGFDGKF MDGVVKMAIR RRVVHVARVT GNALALVNRF
201: ASRHKS

Best Arabidopsis Sequence Match ( AT4G12390.1 )
(BLAST)

001: MEPKLTHLCY CLLLFLPLLC QSTIAKPSSS PNPSSSINFI VSSCRVTRYQ TLCVKCLAAF ADKIRRNENQ LAQTALAVTL VRVQSTTIYV GKLTKARRIK
101: RREYLAVKDC VENLGDGLEM LAQSMRELKQ VGRSGRDRDE FLWRLSNVET WVSAALTDET TCLDGFDGKV MDGVVKSAIR RRVVHVARVT SNALALVNRF
201: AARHKS

Arabidopsis Description

PME1Pectin methylesterase inhibitor 1 [Source:UniProtKB/TrEMBL;Acc:Q9STH2]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.