Factsheet for Bra004439.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80124	Canola	extracellular, vacuole	100.0	100.0
Bra021439.1-P	Field mustard	extracellular, plastid	76.7	77.83
AT2G47670.1	Thale cress	endoplasmic reticulum, plasma membrane	72.82	72.12
Bra007704.1-P	Field mustard	extracellular, plastid	55.83	60.85
PGSC0003DMT400067636	Potato	cytosol	41.75	49.14
Solyc08g006690.1.1	Tomato	nucleus	44.17	46.91
VIT_07s0005g00480.t01	Wine grape	extracellular	40.78	42.86
KRH68192	Soybean	extracellular	39.81	41.62
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	36.89	38.38
Bra006573.1-P	Field mustard	cytosol	16.99	35.71
Bra002328.1-P	Field mustard	extracellular	30.1	30.54
Bra029450.1-P	Field mustard	endoplasmic reticulum, extracellular	29.13	29.41
Bra027019.1-P	Field mustard	endoplasmic reticulum, extracellular	28.64	29.06
Bra018475.1-P	Field mustard	endoplasmic reticulum, plasma membrane	28.64	28.64
Bra027020.1-P	Field mustard	endoplasmic reticulum, extracellular	28.16	28.43
Bra026646.1-P	Field mustard	endoplasmic reticulum, vacuole	28.16	28.02
Bra007939.1-P	Field mustard	extracellular	27.18	27.86
Bra028261.1-P	Field mustard	cytosol, plastid	22.82	27.81
Bra013881.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	27.18	27.72
Bra019179.1-P	Field mustard	extracellular	26.21	26.87
Bra016678.1-P	Field mustard	endoplasmic reticulum, extracellular	26.21	26.87
Bra026180.1-P	Field mustard	endoplasmic reticulum, extracellular	26.21	26.87
Bra010076.1-P	Field mustard	endoplasmic reticulum, extracellular	25.73	26.77
Bra003945.1-P	Field mustard	extracellular	27.18	26.54
Bra012366.1-P	Field mustard	endoplasmic reticulum, vacuole	26.7	26.32
Bra035897.1-P	Field mustard	plastid	25.24	26.13
Bra024570.1-P	Field mustard	extracellular, vacuole	27.18	25.45
Bra013879.1-P	Field mustard	plastid	17.96	24.67
Bra013878.1-P	Field mustard	plastid	17.96	24.67
Bra019180.1-P	Field mustard	extracellular	23.79	24.62
Bra017437.1-P	Field mustard	endoplasmic reticulum, vacuole	24.27	24.51
Bra010075.1-P	Field mustard	extracellular	24.27	24.51
Bra018157.1-P	Field mustard	plastid	21.36	23.78
Bra000562.1-P	Field mustard	endoplasmic reticulum, extracellular	23.79	23.67
Bra029267.1-P	Field mustard	endoplasmic reticulum, extracellular	22.82	23.38
Bra024869.1-P	Field mustard	endoplasmic reticulum, extracellular	23.3	22.64
Bra037313.1-P	Field mustard	extracellular	22.33	21.8

Protein Annotations

EnsemblPlants:Bra004439.1	EnsemblPlants:Bra004439.1-P	EnsemblPlantsGene:Bra004439	Gene3D:1.20.140.40	GO:GO:0003674	GO:GO:0004857
GO:GO:0008150	GO:GO:0030234	GO:GO:0043086	InterPro:IPR035513	InterPro:Invertase/methylesterase_inhib	InterPro:Pectinesterase_inhib_dom
PANTHER:PTHR31080	PANTHER:PTHR31080:SF16	PFAM:PF04043	SEG:seg	SignalP:SignalP-noTM	SMART:SM00856
SUPFAM:SSF101148	TIGRFAMs:TIGR01614	UniParc:UPI0002547FD6	UniProt:M4CJQ5	MapMan:35.1	:

Description

AT2G47670 (E=3e-063) | invertase/pectin methylesterase inhibitor family protein

Coordinates

chrA05:+:118022..118642

Molecular Weight (calculated)

23312.2 Da

IEP (calculated)

9.684

GRAVY (calculated)

-0.184

Length

206 amino acids

Sequence
(BLAST)

001: MNSYLIMYTL LSLLLLALSP KPSLASTRNY TDDTNASIVP RYSRYVKDAC NVTRYKQLCL RTLWPFTIVA KNNSSKWARA GVAVTITDTK RILRLLLKTR
101: NSSAVGKRER IALSDCRELY VDSLDNLYQS LSVLRKLDAD QFQQQMSDLA TWLSAALTDE DTCLDGFEET MSKSSTVRMI KRKATRCMHL CSNALALTNK
201: LAYDGL

Best Arabidopsis Sequence Match ( AT2G47670.1 )
(BLAST)

001: MTSSSSSPIT FTLLLLLSLL VALNPNPSLA STGSNINTND IVTQYSTYVR NACNVTRYNR LCVRTLWPFA IVARNNTSKW ARASVAVTIT DTKRVLRLLL
101: KTQRSAVGES ERIALSDCRE LFVDSLDNLY KSLAVLRTLN ADEFQRQISD LATWLSAALT DDDTCLDGFE ETSSRTRTVR MVRRKATKCM RLCSNALALL
201: KKLAFDGL

Arabidopsis Description

PMEI6Pectinesterase inhibitor 6 [Source:UniProtKB/Swiss-Prot;Acc:O22244]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.