Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400067636 | Potato | cytosol | 87.63 | 97.14 |
| VIT_07s0005g00480.t01 | Wine grape | extracellular | 58.76 | 58.16 |
| CDX76665 | Canola | plastid | 50.0 | 51.32 |
| Bra007704.1-P | Field mustard | extracellular, plastid | 49.48 | 50.79 |
| KRH68192 | Soybean | extracellular | 51.55 | 50.76 |
| CDY11451 | Canola | extracellular, plastid | 48.97 | 50.26 |
| AT3G62820.1 | Thale cress | extracellular | 47.94 | 47.94 |
| CDY53010 | Canola | extracellular, plasma membrane | 46.91 | 44.17 |
| CDX80124 | Canola | extracellular, vacuole | 46.91 | 44.17 |
| Bra004439.1-P | Field mustard | extracellular, vacuole | 46.91 | 44.17 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, extracellular | 43.3 | 42.42 |
| AT2G47670.1 | Thale cress | endoplasmic reticulum, plasma membrane | 42.78 | 39.9 |
| Bra021439.1-P | Field mustard | extracellular, plastid | 39.69 | 37.93 |
| Solyc03g083770.1.1 | Tomato | nucleus | 31.96 | 31.0 |
| Solyc03g083730.1.1 | Tomato | nucleus | 31.96 | 30.85 |
| Solyc07g042390.1.1 | Tomato | nucleus | 29.38 | 30.48 |
| Solyc12g009270.1.1 | Tomato | nucleus | 28.35 | 29.41 |
| Solyc03g083720.1.1 | Tomato | endoplasmic reticulum, plastid | 29.38 | 27.27 |
| Solyc10g018320.1.1 | Tomato | extracellular | 28.87 | 27.18 |
| Solyc06g034370.1.1 | Tomato | extracellular | 26.29 | 26.56 |
| Solyc08g007450.1.1 | Tomato | extracellular | 27.32 | 26.24 |
| Solyc10g076730.1.1 | Tomato | extracellular | 28.35 | 26.19 |
| Solyc01g091110.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 28.87 | 26.17 |
| Solyc01g091100.2.1 | Tomato | extracellular | 26.8 | 25.24 |
| Solyc03g083660.1.1 | Tomato | endoplasmic reticulum, extracellular | 24.74 | 24.74 |
| Solyc03g083710.1.1 | Tomato | nucleus | 24.23 | 24.1 |
| Solyc11g019910.1.1 | Tomato | extracellular | 24.23 | 23.98 |
| Solyc10g018330.1.1 | Tomato | endoplasmic reticulum, extracellular | 27.32 | 23.77 |
| Solyc03g083700.1.1 | Tomato | endoplasmic reticulum, extracellular | 20.62 | 21.05 |
Protein Annotations
| EnsemblPlants:Solyc08g006690.1.1 | EnsemblPlantsGene:Solyc08g006690.1 | Gene3D:1.20.140.40 | GO:GO:0003674 | GO:GO:0004857 | GO:GO:0008150 |
| GO:GO:0030234 | GO:GO:0043086 | InterPro:IPR035513 | InterPro:Invertase/methylesterase_inhib | InterPro:Pectinesterase_inhib_dom | PANTHER:PTHR31080 |
| PANTHER:PTHR31080:SF16 | PFAM:PF04043 | SignalP:SignalP-noTM | SMART:SM00856 | SUPFAM:SSF101148 | TIGRFAMs:TIGR01614 |
| UniParc:UPI000276C230 | UniProt:K4CIF7 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr8:+:1257744..1258328
Molecular Weight (calculated)
21176.6 Da
IEP (calculated)
8.651
GRAVY (calculated)
-0.074
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNNLMLVLA CLTSLTCSTM CLSKGGESYV RDACSVTRYQ DLCLHSLASF SRTAKDNPSK WARAGVSVTI SQAKGVTQFL LKLRKSNFLK GKSRVAILDC
101: VECLQDALDN LHNSLGVLRK LSSQAFNDQM GDVTTWLSAA LTDEDTCLDG LEDKKRKQVK LLLNKVTNVS YMTSNALALV NKLATTGPQC LENS
101: VECLQDALDN LHNSLGVLRK LSSQAFNDQM GDVTTWLSAA LTDEDTCLDG LEDKKRKQVK LLLNKVTNVS YMTSNALALV NKLATTGPQC LENS
001: MKTPMSSSIT FALVFFLLSL NPTSSLPSKR ESYVQNACSV TRYQDLCAKT LLPFASVAKN SPSKWARAGV SVAITDNKDV LRHLLKTRLS TIGKRDRIAL
101: SDCRELLQDS LDSLHKSLAV LRTLRASEFQ QQMSDLATWL SSSLTDKDTC LDGFEKTSTR SSSTVRMIRK RVTTSMYLSS NSLALLNKLA ANGL
101: SDCRELLQDS LDSLHKSLAV LRTLRASEFQ QQMSDLATWL SSSLTDKDTC LDGFEKTSTR SSSTVRMIRK RVTTSMYLSS NSLALLNKLA ANGL
Arabidopsis Description
Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LZI3]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.