Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- plasma membrane 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400035274 | Potato | extracellular | 90.37 | 89.42 |
| VIT_11s0016g00590.t01 | Wine grape | extracellular | 58.82 | 58.51 |
| Solyc12g009270.1.1 | Tomato | nucleus | 57.75 | 57.75 |
| Bra006573.1-P | Field mustard | cytosol | 29.41 | 56.12 |
| CDY16561 | Canola | extracellular | 53.48 | 51.02 |
| Bra002328.1-P | Field mustard | extracellular | 53.48 | 49.26 |
| CDY72130 | Canola | extracellular | 53.48 | 49.26 |
| CDX92436 | Canola | extracellular | 52.94 | 48.77 |
| CDX70942 | Canola | extracellular | 52.94 | 48.53 |
| KRH12602 | Soybean | extracellular | 51.34 | 44.44 |
| KRH37544 | Soybean | endoplasmic reticulum, extracellular | 49.2 | 42.99 |
| KRH02570 | Soybean | extracellular | 45.99 | 41.95 |
| AT5G20740.2 | Thale cress | endoplasmic reticulum, extracellular, plastid | 51.87 | 40.59 |
| Solyc03g083770.1.1 | Tomato | nucleus | 37.97 | 35.5 |
| Solyc06g034370.1.1 | Tomato | extracellular | 36.36 | 35.42 |
| Solyc03g083720.1.1 | Tomato | endoplasmic reticulum, plastid | 38.5 | 34.45 |
| Solyc03g083730.1.1 | Tomato | nucleus | 36.9 | 34.33 |
| Solyc10g076730.1.1 | Tomato | extracellular | 35.83 | 31.9 |
| Solyc08g007450.1.1 | Tomato | extracellular | 34.22 | 31.68 |
| Solyc08g006690.1.1 | Tomato | nucleus | 30.48 | 29.38 |
| Solyc10g018320.1.1 | Tomato | extracellular | 31.55 | 28.64 |
| Solyc01g091110.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 32.09 | 28.04 |
| Solyc01g091100.2.1 | Tomato | extracellular | 29.95 | 27.18 |
| Solyc03g083660.1.1 | Tomato | endoplasmic reticulum, extracellular | 27.27 | 26.29 |
| Solyc10g018330.1.1 | Tomato | endoplasmic reticulum, extracellular | 30.48 | 25.56 |
| Solyc11g019910.1.1 | Tomato | extracellular | 26.74 | 25.51 |
| Solyc03g083700.1.1 | Tomato | endoplasmic reticulum, extracellular | 25.67 | 25.26 |
| Solyc03g083710.1.1 | Tomato | nucleus | 25.67 | 24.62 |
Protein Annotations
| EnsemblPlants:Solyc07g042390.1.1 | EnsemblPlantsGene:Solyc07g042390.1 | Gene3D:1.20.140.40 | GO:GO:0003674 | GO:GO:0004857 | GO:GO:0008150 |
| GO:GO:0030234 | GO:GO:0043086 | InterPro:IPR035513 | InterPro:Invertase/methylesterase_inhib | InterPro:Pectinesterase_inhib_dom | ncoils:Coil |
| PANTHER:PTHR31080 | PANTHER:PTHR31080:SF26 | PFAM:PF04043 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00856 |
| SUPFAM:SSF101148 | TIGRFAMs:TIGR01614 | UniParc:UPI000276BE16 | UniProt:K4CEA0 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr7:-:55528735..55529298
Molecular Weight (calculated)
20547.5 Da
IEP (calculated)
9.553
GRAVY (calculated)
-0.272
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTLLVSLFL ISSVTTSSSS SASDIVRSSC VHASYPTICV RTLSSYSDTP INTPQDLAQA AVKITLSRAG KASGFLSRVK VESKREKGAL SDCIEQMGDS
101: MEELRKSLSE LKHVRRGNAF KWQMSNLETW VSAALTNEDT CLDGFKEIDG KIRSDVKRKI TNVARVTSNA LYLINRLDDS ANKITHP
101: MEELRKSLSE LKHVRRGNAF KWQMSNLETW VSAALTNEDT CLDGFKEIDG KIRSDVKRKI TNVARVTSNA LYLINRLDDS ANKITHP
001: MAPTQNLFLV AIAFAVIFTA STVHGRHNGA EDIVHSSCEH ASYPSLCVRT LSSYSGPTIT NRRDLAQAAI KISLSHAQSA AKKLAVVRDS VGKKKQEKAA
101: LVDCVEMIGD SVDELSRTLG VLKHLRVSGG SAKEFRWQMS NAQTWASAAL TDDDTCLDGF QGMDDGEIKT EVKQWMTKVA RVTSNALYMV NQLDETRGKP
201: HDVHL
101: LVDCVEMIGD SVDELSRTLG VLKHLRVSGG SAKEFRWQMS NAQTWASAAL TDDDTCLDGF QGMDDGEIKT EVKQWMTKVA RVTSNALYMV NQLDETRGKP
201: HDVHL
Arabidopsis Description
Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:TAIR;Acc:AT5G20740]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.