Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, extracellular
Predictor Summary:
Predictor Summary:
- plastid 3
- endoplasmic reticulum 2
- plasma membrane 2
- extracellular 2
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006573.1-P | Field mustard | cytosol | 35.98 | 87.76 |
| CDY72130 | Canola | extracellular | 68.62 | 80.79 |
| Bra002328.1-P | Field mustard | extracellular | 68.2 | 80.3 |
| CDY16561 | Canola | extracellular | 65.69 | 80.1 |
| CDX92436 | Canola | extracellular | 67.78 | 79.8 |
| CDX70942 | Canola | extracellular | 67.36 | 78.92 |
| VIT_11s0016g00590.t01 | Wine grape | extracellular | 44.77 | 56.91 |
| Solyc07g042390.1.1 | Tomato | nucleus | 40.59 | 51.87 |
| PGSC0003DMT400035274 | Potato | extracellular | 41.0 | 51.85 |
| Solyc12g009270.1.1 | Tomato | nucleus | 34.31 | 43.85 |
| PGSC0003DMT400007510 | Potato | extracellular | 34.31 | 42.27 |
| KRH37544 | Soybean | endoplasmic reticulum, extracellular | 37.66 | 42.06 |
| KRH12602 | Soybean | extracellular | 37.66 | 41.67 |
| KRH02570 | Soybean | extracellular | 34.73 | 40.49 |
| AT5G62350.1 | Thale cress | extracellular | 30.54 | 36.14 |
| AT1G62770.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 30.54 | 35.78 |
| AT4G25260.1 | Thale cress | endoplasmic reticulum, extracellular | 28.87 | 34.33 |
| AT4G12390.1 | Thale cress | endoplasmic reticulum, plasma membrane | 28.87 | 33.5 |
| AT3G47380.1 | Thale cress | extracellular | 26.36 | 31.19 |
| AT2G01610.1 | Thale cress | endoplasmic reticulum, extracellular | 28.87 | 31.08 |
| AT5G62360.1 | Thale cress | endoplasmic reticulum, extracellular, plastid | 26.36 | 31.03 |
| AT1G14890.1 | Thale cress | cytosol, golgi, mitochondrion, plastid | 27.2 | 29.68 |
| AT4G00080.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 25.94 | 29.67 |
| AT2G47670.1 | Thale cress | endoplasmic reticulum, plasma membrane | 25.1 | 28.85 |
| AT1G23205.1 | Thale cress | endoplasmic reticulum, vacuole | 24.27 | 28.29 |
| AT3G62820.1 | Thale cress | extracellular | 22.59 | 27.84 |
| AT1G70720.2 | Thale cress | plastid | 24.69 | 27.83 |
| AT4G25250.1 | Thale cress | extracellular | 20.92 | 25.13 |
| AT5G51520.1 | Thale cress | extracellular | 21.34 | 25.0 |
| AT1G62760.1 | Thale cress | plastid | 26.36 | 20.19 |
Protein Annotations
| Gene3D:1.20.140.40 | MapMan:35.1 | EntrezGene:832197 | UniProt:A0A1P8BFL4 | ProteinID:ANM70403.1 | ArrayExpress:AT5G20740 |
| EnsemblPlantsGene:AT5G20740 | RefSeq:AT5G20740 | TAIR:AT5G20740 | RefSeq:AT5G20740-TAIR-G | EnsemblPlants:AT5G20740.2 | GO:GO:0003674 |
| GO:GO:0004857 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0043086 | InterPro:IPR035513 | InterPro:Invertase/methylesterase_inhib |
| RefSeq:NP_001332017.1 | PFAM:PF04043 | PANTHER:PTHR31080 | PANTHER:PTHR31080:SF26 | InterPro:Pectinesterase_inhib_dom | SMART:SM00856 |
| SUPFAM:SSF101148 | TIGRFAMs:TIGR01614 | UniParc:UPI000848E18E | : | : | : |
Description
Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:TAIR;Acc:AT5G20740]
Coordinates
chr5:-:7025615..7026753
Molecular Weight (calculated)
26228.3 Da
IEP (calculated)
7.641
GRAVY (calculated)
-0.131
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MFYGPTTLNS YPPPLSFSFA HITLIWSLTL TREIMAPTQN LFLVAIAFAV IFTASTVHGR HNGAEDIVHS SCEHASYPSL CVRTLSSYSG PTITNRRDLA
101: QAAIKISLSH AQSAAKKLAV VRDSVGKKKQ EKAALVDCVE MIGDSVDELS RTLGVLKHLR VSGGSAKEFR WQMSNAQTWA SAALTDDDTC LDGFQGMDDG
201: EIKTEVKQWM TKVARVTSNA LYMVNQLDET RGKPHDVHL
101: QAAIKISLSH AQSAAKKLAV VRDSVGKKKQ EKAALVDCVE MIGDSVDELS RTLGVLKHLR VSGGSAKEFR WQMSNAQTWA SAALTDDDTC LDGFQGMDDG
201: EIKTEVKQWM TKVARVTSNA LYMVNQLDET RGKPHDVHL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.