Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52024 | Canola | endoplasmic reticulum, extracellular | 80.37 | 87.56 |
| Bra016678.1-P | Field mustard | endoplasmic reticulum, extracellular | 79.91 | 87.06 |
| CDX83999 | Canola | endoplasmic reticulum, extracellular, plastid | 78.54 | 85.57 |
| CDY53526 | Canola | endoplasmic reticulum, extracellular | 68.49 | 82.42 |
| CDY45298 | Canola | endoplasmic reticulum, extracellular | 75.34 | 82.09 |
| Bra026180.1-P | Field mustard | endoplasmic reticulum, extracellular | 75.34 | 82.09 |
| AT2G01610.1 | Thale cress | endoplasmic reticulum, extracellular | 66.21 | 65.32 |
| KRH41681 | Soybean | extracellular | 51.14 | 52.34 |
| KRH60383 | Soybean | extracellular | 49.77 | 50.93 |
| KRH38255 | Soybean | extracellular | 46.12 | 48.56 |
| VIT_01s0011g05410.t01 | Wine grape | extracellular | 45.66 | 48.31 |
| Solyc10g076730.1.1 | Tomato | extracellular | 45.21 | 47.14 |
| PGSC0003DMT400049198 | Potato | extracellular | 44.75 | 46.67 |
| VIT_01s0011g05390.t01 | Wine grape | extracellular | 43.84 | 44.44 |
| AT1G23205.1 | Thale cress | endoplasmic reticulum, vacuole | 41.1 | 43.9 |
| AT1G70720.2 | Thale cress | plastid | 38.36 | 39.62 |
| AT4G25260.1 | Thale cress | endoplasmic reticulum, extracellular | 32.88 | 35.82 |
| AT5G62350.1 | Thale cress | extracellular | 32.42 | 35.15 |
| AT4G12390.1 | Thale cress | endoplasmic reticulum, plasma membrane | 32.88 | 34.95 |
| AT3G47380.1 | Thale cress | extracellular | 31.96 | 34.65 |
| GSMUA_Achr6P05900_001 | Banana | extracellular | 31.96 | 33.98 |
| AT1G62770.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 31.51 | 33.82 |
| GSMUA_Achr2P15160_001 | Banana | extracellular | 30.59 | 33.5 |
| GSMUA_Achr8P30920_001 | Banana | extracellular | 28.31 | 31.31 |
| AT4G00080.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 29.68 | 31.1 |
| AT5G62360.1 | Thale cress | endoplasmic reticulum, extracellular, plastid | 28.77 | 31.03 |
| Os10t0185400-00 | Rice | extracellular | 30.14 | 29.07 |
| EES08718 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 30.59 | 29.0 |
| AT5G51520.1 | Thale cress | extracellular | 25.57 | 27.45 |
| AT5G20740.2 | Thale cress | endoplasmic reticulum, extracellular, plastid | 29.68 | 27.2 |
| AT3G62820.1 | Thale cress | extracellular | 23.74 | 26.8 |
| Zm00001d030035_P001 | Maize | endoplasmic reticulum, extracellular | 26.48 | 26.48 |
| Zm00001d052935_P001 | Maize | mitochondrion | 29.22 | 26.34 |
| AT4G25250.1 | Thale cress | extracellular | 23.74 | 26.13 |
| AT2G47670.1 | Thale cress | endoplasmic reticulum, plasma membrane | 23.74 | 25.0 |
| OQU92294 | Sorghum | extracellular, plastid | 25.57 | 24.78 |
| EER94449 | Sorghum | plastid | 24.66 | 24.66 |
| TraesCS3B01G482700.1 | Wheat | plastid | 24.66 | 23.89 |
| AT1G62760.1 | Thale cress | plastid | 33.79 | 23.72 |
| TraesCS3D01G439800.1 | Wheat | plastid | 23.74 | 23.01 |
| TraesCS3A01G447100.1 | Wheat | extracellular, plasma membrane | 23.74 | 22.91 |
| Os10t0186200-00 | Rice | plasma membrane, plastid | 21.92 | 19.75 |
Protein Annotations
| Gene3D:1.20.140.40 | MapMan:35.1 | EntrezGene:838054 | ProteinID:AEE29239.1 | ArrayExpress:AT1G14890 | EnsemblPlantsGene:AT1G14890 |
| RefSeq:AT1G14890 | TAIR:AT1G14890 | RefSeq:AT1G14890-TAIR-G | EnsemblPlants:AT1G14890.1 | TAIR:AT1G14890.1 | UniProt:F4HXW0 |
| GO:GO:0003674 | GO:GO:0004857 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0043086 | InterPro:IPR035513 |
| InterPro:Invertase/methylesterase_inhib | RefSeq:NP_563960.2 | PFAM:PF04043 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31080 | PANTHER:PTHR31080:SF10 | InterPro:Pectinesterase_inhib_dom |
| SMART:SM00856 | SUPFAM:SSF101148 | TIGRFAMs:TIGR01614 | TMHMM:TMhelix | UniParc:UPI0001738F96 | SEG:seg |
Description
Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HXW0]
Coordinates
chr1:+:5136874..5137982
Molecular Weight (calculated)
24323.0 Da
IEP (calculated)
8.352
GRAVY (calculated)
-0.289
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTRNKEEIN RVKNLKLKMG RQLYTTTVLY LVTLLFICRT ISAVRFPPEQ PTTDDLDFIR TSCNTTLYPD VCYTSLAGYA SAVQDNPARL AKLAIGVSLS
101: RAKYTAAYLS KLSRRAASAA VHDCVSNVGD AVDQMRGSLR QLREMNHRRP GDPAFRFQMS NVQTWMSAAL TDEETCTDGV TEEMEDGETK TAICDRVADV
201: KRFTSNALAL VNTYANNGA
101: RAKYTAAYLS KLSRRAASAA VHDCVSNVGD AVDQMRGSLR QLREMNHRRP GDPAFRFQMS NVQTWMSAAL TDEETCTDGV TEEMEDGETK TAICDRVADV
201: KRFTSNALAL VNTYANNGA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.