Factsheet for GSMUA_Achr6P05900_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 5
plasma membrane 7
endoplasmic reticulum 5
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P15160_001	Banana	extracellular	68.45	70.5
GSMUA_Achr8P30920_001	Banana	extracellular	48.06	50.0
GSMUA_Achr3P26730_001	Banana	extracellular	35.44	42.2
GSMUA_Achr1P00870_001	Banana	extracellular	32.52	39.88
GSMUA_Achr5P19900_001	Banana	endoplasmic reticulum, vacuole	38.35	37.8
VIT_01s0011g05410.t01	Wine grape	extracellular	37.38	37.2
KRH38255	Soybean	extracellular	37.38	37.02
Bra016678.1-P	Field mustard	endoplasmic reticulum, extracellular	35.92	36.82
EES08718	Sorghum	endoplasmic reticulum, plasma membrane, plastid	41.26	36.8
KRH41681	Soybean	extracellular	37.86	36.45
CDY52024	Canola	endoplasmic reticulum, extracellular	35.44	36.32
CDX83999	Canola	endoplasmic reticulum, extracellular, plastid	35.44	36.32
EER94449	Sorghum	plastid	38.35	36.07
GSMUA_Achr8P12460_001	Banana	extracellular	29.61	35.88
Zm00001d052935_P001	Maize	mitochondrion	41.75	35.39
GSMUA_Achr11P...	Banana	extracellular	28.64	35.33
PGSC0003DMT400049198	Potato	extracellular	35.92	35.24
KRH60383	Soybean	extracellular	36.41	35.05
Solyc10g076730.1.1	Tomato	extracellular	35.44	34.76
Zm00001d030035_P001	Maize	endoplasmic reticulum, extracellular	36.89	34.7
CDY53526	Canola	endoplasmic reticulum, extracellular	30.58	34.62
Bra012366.1-P	Field mustard	endoplasmic reticulum, vacuole	34.95	34.45
Os10t0185400-00	Rice	extracellular	37.38	33.92
Bra026180.1-P	Field mustard	endoplasmic reticulum, extracellular	33.01	33.83
CDY45298	Canola	endoplasmic reticulum, extracellular	33.01	33.83
GSMUA_Achr1P04190_001	Banana	extracellular	33.5	33.82
GSMUA_Achr5P12890_001	Banana	endoplasmic reticulum	29.61	33.52
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	32.04	33.33
AT2G01610.1	Thale cress	endoplasmic reticulum, extracellular	35.92	33.33
CDY72606	Canola	endoplasmic reticulum, extracellular	33.98	33.18
AT1G23205.1	Thale cress	endoplasmic reticulum, vacuole	33.01	33.17
CDY09429	Canola	endoplasmic reticulum, vacuole	33.01	32.85
CDY04097	Canola	endoplasmic reticulum, vacuole	32.52	32.84
Bra017437.1-P	Field mustard	endoplasmic reticulum, vacuole	32.04	32.35
CDY17457	Canola	endoplasmic reticulum, vacuole	32.04	32.35
CDY21423	Canola	plastid	29.13	32.26
CDY09473	Canola	extracellular	31.55	32.18
CDY25774	Canola	endoplasmic reticulum, plastid	34.95	32.14
AT1G14890.1	Thale cress	cytosol, golgi, mitochondrion, plastid	33.98	31.96
Bra026646.1-P	Field mustard	endoplasmic reticulum, vacuole	32.04	31.88
CDY48809	Canola	endoplasmic reticulum, vacuole	32.04	31.88
OQU92294	Sorghum	extracellular, plastid	34.95	31.86
VIT_01s0011g05390.t01	Wine grape	extracellular	33.01	31.48
Bra024570.1-P	Field mustard	extracellular, vacuole	33.5	31.36
CDY03725	Canola	extracellular	30.58	31.34
Bra007939.1-P	Field mustard	extracellular	30.58	31.34
GSMUA_Achr4P24680_001	Banana	endoplasmic reticulum, mitochondrion, plastid, vacuole	32.52	30.88
AT1G70720.2	Thale cress	plastid	31.55	30.66
CDY23485	Canola	endoplasmic reticulum, extracellular	31.07	30.48
CDX68333	Canola	extracellular	31.07	30.33
Bra003945.1-P	Field mustard	extracellular	31.07	30.33
Os10t0186200-00	Rice	plasma membrane, plastid	33.98	28.81
TraesCS3B01G482700.1	Wheat	plastid	31.07	28.32
TraesCS3A01G447100.1	Wheat	extracellular, plasma membrane	31.07	28.19
TraesCS3D01G439800.1	Wheat	plastid	29.13	26.55
CDY36241	Canola	endoplasmic reticulum, vacuole	24.27	23.58
Bra024869.1-P	Field mustard	endoplasmic reticulum, extracellular	24.27	23.58
CDY17658	Canola	endoplasmic reticulum, vacuole	24.27	23.58

Protein Annotations

Gene3D:1.20.140.40	MapMan:35.1	GO:GO:0003674	GO:GO:0004857	GO:GO:0008150	GO:GO:0030234
GO:GO:0043086	EnsemblPlantsGene:GSMUA_Achr6G05900_001	EnsemblPlants:GSMUA_Achr6P05900_001	EnsemblPlants:GSMUA_Achr6T05900_001	InterPro:IPR035513	InterPro:Invertase/methylesterase_inhib
UniProt:M0T4I8	PFAM:PF04043	PANTHER:PTHR31080	PANTHER:PTHR31080:SF10	InterPro:Pectinesterase_inhib_dom	SMART:SM00856
SUPFAM:SSF101148	SignalP:SignalP-noTM	TIGRFAMs:TIGR01614	UniParc:UPI0002964D06	SEG:seg	:

Description

Putative 21 kDa protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G05900_001]

Coordinates

chr6:+:3986883..3988447

Molecular Weight (calculated)

22074.5 Da

IEP (calculated)

8.378

GRAVY (calculated)

0.119

Length

206 amino acids

Sequence
(BLAST)

001: MLPNSLFFLF FFLFLPLVAC TSVPPPDLAP MSPDENATEF IRARCVLTRY PDLCFTSLSS YASAVRRSPV QLARLATNVT LTRLRALRAH VSALRRAGAG
101: AAGREAAALR DCAEQLGDAA DQVGRTAAEL RGLEALVGME VAWRVSNAQT WMSAALTNED TCSDGFREMG GGGTSSIRTD VCRRVGRVIQ YTSNALALVN
201: SLVNGG

Best Arabidopsis Sequence Match ( AT2G01610.1 )
(BLAST)

001: MVTVSQSHTT TFLFFTTFLL IFGSISAVRL LPRPNTTTTN DLDFIRTSCN ATLYPDVCFT SLSGYASAVQ DSPARLAKLA IGVSLSQAKS TAAFLSKLSR
101: SAAKYSGDGH QTASAVIRDC VSNVEDAVDE MRGSLRQLRD MNGRGGGTAA RRSVETFRFQ MSNVQTWMSA ALTDEDTCTD GFEDMDEGGL IKTTVCDRLE
201: EVKRLTSNAL ALVNTYANNG AP

Arabidopsis Description

At2g01610 [Source:UniProtKB/TrEMBL;Acc:Q9ZNU5]
SUBAcon: [extracellular,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.