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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012366.1-P Field mustard endoplasmic reticulum, vacuole 94.79 95.69
CDY25774 Canola endoplasmic reticulum, plastid 95.26 89.73
AT1G23205.1 Thale cress endoplasmic reticulum, vacuole 78.2 80.49
CDY21423 Canola plastid 67.3 76.34
CDY03725 Canola extracellular 57.35 60.2
CDY09473 Canola extracellular 56.87 59.41
CDX68333 Canola extracellular 55.45 55.45
CDY23485 Canola endoplasmic reticulum, extracellular 54.98 55.24
KRH41681 Soybean extracellular 50.71 50.0
KRH60383 Soybean extracellular 50.71 50.0
KRH38255 Soybean extracellular 47.39 48.08
VIT_01s0011g05410.t01 Wine grape extracellular 46.92 47.83
CDY52024 Canola endoplasmic reticulum, extracellular 45.5 47.76
CDX83999 Canola endoplasmic reticulum, extracellular, plastid 44.08 46.27
VIT_01s0011g05390.t01 Wine grape extracellular 46.45 45.37
CDY45298 Canola endoplasmic reticulum, extracellular 43.13 45.27
PGSC0003DMT400049198 Potato extracellular 44.55 44.76
Solyc10g076730.1.1 Tomato extracellular 44.08 44.29
CDY53526 Canola endoplasmic reticulum, extracellular 37.44 43.41
CDY48809 Canola endoplasmic reticulum, vacuole 39.34 40.1
CDY09429 Canola endoplasmic reticulum, vacuole 38.39 39.13
CDX92686 Canola cytosol, nucleus, plastid 16.11 39.08
CDY17457 Canola endoplasmic reticulum, vacuole 36.49 37.75
CDY04097 Canola endoplasmic reticulum, vacuole 36.49 37.75
CDX92687 Canola extracellular 34.12 35.82
CDY11066 Canola extracellular 33.65 35.32
CDY00278 Canola extracellular 33.65 34.8
CDX86904 Canola extracellular 33.65 34.8
CDY52309 Canola endoplasmic reticulum, vacuole 33.18 34.31
CDX86708 Canola endoplasmic reticulum, vacuole 33.18 34.31
CDY46918 Canola endoplasmic reticulum, extracellular 33.18 34.31
CDY65618 Canola extracellular 33.18 33.98
GSMUA_Achr6P05900_001 Banana extracellular 33.18 33.98
CDX94463 Canola extracellular 32.23 33.83
CDX89429 Canola extracellular 32.23 33.83
CDY31839 Canola endoplasmic reticulum, extracellular 32.7 33.82
CDX99059 Canola extracellular 32.23 33.66
CDY70789 Canola extracellular 32.23 33.66
CDY30715 Canola endoplasmic reticulum, extracellular 31.75 33.33
CDX87244 Canola plastid 31.28 33.17
CDY11065 Canola extracellular 31.28 33.17
CDX97343 Canola endoplasmic reticulum, plasma membrane 32.23 33.01
GSMUA_Achr2P15160_001 Banana extracellular 31.28 33.0
CDY16779 Canola plastid 30.81 32.66
CDY31841 Canola endoplasmic reticulum, extracellular 31.28 32.51
CDY16561 Canola extracellular 29.86 32.14
CDY46921 Canola endoplasmic reticulum, extracellular 30.81 32.02
CDY00484 Canola extracellular 30.33 31.37
CDY68609 Canola extracellular 30.33 31.37
CDY34685 Canola extracellular 30.33 31.07
CDY00279 Canola endoplasmic reticulum, extracellular 28.91 30.81
CDX76665 Canola plastid 27.49 30.69
CDY72130 Canola extracellular 29.38 30.54
CDX86901 Canola endoplasmic reticulum, extracellular, plastid 28.91 30.5
GSMUA_Achr8P30920_001 Banana extracellular 28.44 30.3
CDX70942 Canola extracellular 28.91 29.9
CDX91588 Canola extracellular 29.38 29.67
CDY11451 Canola extracellular, plastid 26.54 29.63
CDX92436 Canola extracellular 28.44 29.56
CDX94465 Canola extracellular 27.49 29.15
CDX89431 Canola extracellular 27.49 29.15
CDX89432 Canola extracellular 27.49 29.15
CDY70934 Canola extracellular 27.96 28.92
CDY36241 Canola endoplasmic reticulum, vacuole 27.96 27.83
EES08718 Sorghum endoplasmic reticulum, plasma membrane, plastid 30.33 27.71
CDY17658 Canola endoplasmic reticulum, vacuole 27.49 27.36
Os10t0185400-00 Rice extracellular 29.38 27.31
CDY11064 Canola extracellular 31.28 27.27
CDX80124 Canola extracellular, vacuole 26.54 27.18
Zm00001d052935_P001 Maize mitochondrion 30.81 26.75
CDY53010 Canola extracellular, plasma membrane 26.07 26.7
CDX89430 Canola extracellular 23.22 25.13
CDY21496 Canola endoplasmic reticulum, extracellular 24.64 25.12
CDX83212 Canola endoplasmic reticulum, extracellular 24.64 25.12
Zm00001d030035_P001 Maize endoplasmic reticulum, extracellular 26.07 25.11
TraesCS3D01G439800.1 Wheat plastid 26.54 24.78
CDY63067 Canola extracellular 24.17 24.17
CDX94464 Canola extracellular 22.27 24.1
TraesCS3B01G482700.1 Wheat plastid 25.59 23.89
TraesCS3A01G447100.1 Wheat extracellular, plasma membrane 25.59 23.79
OQU92294 Sorghum extracellular, plastid 25.12 23.45
EER94449 Sorghum plastid 24.17 23.29
Os10t0186200-00 Rice plasma membrane, plastid 22.27 19.34
Protein Annotations
KEGG:00040+3.1.1.11KEGG:00500+3.1.1.11Gene3D:1.20.140.40MapMan:35.1GO:A0A078K4B7UniProt:A0A078K4B7
EnsemblPlants:CDY72606ProteinID:CDY72606ProteinID:CDY72606.1ncoils:CoilGO:GO:0003674GO:GO:0004857
GO:GO:0008150GO:GO:0030234GO:GO:0043086EnsemblPlantsGene:GSBRNA2T00033923001InterPro:IPR035513InterPro:Invertase/methylesterase_inhib
PFAM:PF04043PANTHER:PTHR31080PANTHER:PTHR31080:SF10MetaCyc:PWY-1081MetaCyc:PWY-7246MetaCyc:PWY-7248
InterPro:Pectinesterase_inhib_domSMART:SM00856SUPFAM:SSF101148SignalP:SignalP-noTMTIGRFAMs:TIGR01614TMHMM:TMhelix
UniPathway:UPA00545UniParc:UPI0004EEE5C8SEG:seg:::
Description
BnaCnng78530DBnaCnng78530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K4B7]
Coordinates
chrLK052204:+:1050..1981
Molecular Weight (calculated)
23114.5 Da
IEP (calculated)
5.259
GRAVY (calculated)
-0.014
Length
211 amino acids
Sequence
(BLAST)
001: MKKPSLHTSL IFFFFLATLL PIILTVHSQP SSLPSDDSDF IRTSCNTTLY PVLCVSSLSN FSSSVNNDPA LLARAAISVT LSKALELGSY LSNVTALLKS
101: QVENGGHPAA AVVFHDCFEN LKDAVDEMRG SMKQMRDLVS TGSLESFRFQ MSNVQTWLSA ALTDEETCTD GFKDVQDEPR KDEVCARVDD VKKLTSNALA
201: LVNRCVDKAM H
Best Arabidopsis Sequence Match ( AT1G23205.1 )
(BLAST)
001: MKLSLHQPLL FFFLASVLPL ILTVHSQSDD SDFIRTSCNT TLYPDLCFSS LSSFSSSVHN DPALLARAAI SVTLTKTLDL ASYLANITTL QPESNEDGAH
101: HPTAAAVFHD CFDNLKDAVE EMKGSMKQMR ELVSTGSLES FRFQMSNVQT WLSAALTDEE TCTDGFKDIH DEPRKDDICA RVDDVKKMTS NALALVNRCV
201: DKAIH
Arabidopsis Description
At1g23205 [Source:UniProtKB/TrEMBL;Acc:O49297]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.