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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97343 Canola endoplasmic reticulum, plasma membrane 96.6 96.6
CDX86708 Canola endoplasmic reticulum, vacuole 87.86 88.73
AT4G12390.1 Thale cress endoplasmic reticulum, plasma membrane 87.86 87.86
CDY52309 Canola endoplasmic reticulum, vacuole 86.89 87.75
CDY46921 Canola endoplasmic reticulum, extracellular 53.4 54.19
CDY31841 Canola endoplasmic reticulum, extracellular 52.91 53.69
CDY34685 Canola extracellular 52.91 52.91
KRH77402 Soybean extracellular 51.94 52.71
PGSC0003DMT400012073 Potato plastid 44.66 50.27
VIT_00s0323g00050.t01 Wine grape extracellular 48.54 50.25
GSMUA_Achr11P... Banana extracellular 39.32 48.5
GSMUA_Achr1P00870_001 Banana extracellular 38.84 47.62
PGSC0003DMT400032573 Potato cytosol 25.24 47.27
GSMUA_Achr8P12460_001 Banana extracellular 38.35 46.47
CDX89429 Canola extracellular 43.2 44.28
CDX92687 Canola extracellular 42.72 43.78
CDX86904 Canola extracellular 43.2 43.63
CDY11066 Canola extracellular 42.23 43.28
CDX94463 Canola extracellular 42.23 43.28
CDY00278 Canola extracellular 42.72 43.14
KRH04067 Soybean extracellular 44.17 42.72
CDY30715 Canola endoplasmic reticulum, extracellular 41.26 42.29
Solyc08g007450.1.1 Tomato extracellular 41.26 42.08
GSMUA_Achr3P26730_001 Banana extracellular 34.95 41.62
Os04t0106000-01 Rice extracellular 34.95 40.68
KRH57338 Soybean endoplasmic reticulum, extracellular 41.75 40.0
CDY46918 Canola endoplasmic reticulum, extracellular 39.32 39.71
CDY31839 Canola endoplasmic reticulum, extracellular 39.32 39.71
GSMUA_Achr5P12890_001 Banana endoplasmic reticulum 34.95 39.56
CDX87244 Canola plastid 37.86 39.2
CDX99059 Canola extracellular 38.35 39.11
CDY70789 Canola extracellular 38.35 39.11
KXG20844 Sorghum extracellular 37.86 38.61
CDX86901 Canola endoplasmic reticulum, extracellular, plastid 37.38 38.5
CDY16779 Canola plastid 36.89 38.19
Os06t0711800-01 Rice extracellular 36.89 38.0
CDY00279 Canola endoplasmic reticulum, extracellular 36.41 37.88
Zm00001d024913_P001 Maize extracellular 36.89 37.44
CDX92686 Canola cytosol, nucleus, plastid 15.53 36.78
TraesCS7D01G400200.1 Wheat extracellular, golgi 36.41 36.76
TraesCS7B01G306500.1 Wheat extracellular, golgi 35.92 36.27
HORVU7Hr1G095080.4 Barley mitochondrion, plastid 35.92 36.27
TraesCS7A01G406500.1 Wheat extracellular, golgi 35.92 36.1
EES11737 Sorghum extracellular 37.38 35.98
Zm00001d014757_P001 Maize extracellular, vacuole 37.38 35.98
CDX83999 Canola endoplasmic reticulum, extracellular, plastid 34.95 35.82
CDY52024 Canola endoplasmic reticulum, extracellular 34.95 35.82
Zm00001d036431_P001 Maize extracellular 37.86 35.29
KXG20845 Sorghum extracellular 36.89 35.02
CDY45298 Canola endoplasmic reticulum, extracellular 33.98 34.83
CDY03725 Canola extracellular 33.5 34.33
CDY16561 Canola extracellular 32.52 34.18
TraesCS2A01G036100.1 Wheat extracellular 34.95 33.96
TraesCS2D01G035100.1 Wheat extracellular 34.95 33.8
CDY53526 Canola endoplasmic reticulum, extracellular 29.61 33.52
CDY72130 Canola extracellular 33.01 33.5
TraesCS2B01G049000.1 Wheat extracellular 34.47 33.33
CDY72606 Canola endoplasmic reticulum, extracellular 33.98 33.18
CDY09473 Canola extracellular 32.52 33.17
CDX70942 Canola extracellular 32.52 32.84
CDX92436 Canola extracellular 32.04 32.51
CDY23485 Canola endoplasmic reticulum, extracellular 32.52 31.9
CDY21496 Canola endoplasmic reticulum, extracellular 32.04 31.88
CDY48809 Canola endoplasmic reticulum, vacuole 32.04 31.88
CDX68333 Canola extracellular 32.52 31.75
CDY09429 Canola endoplasmic reticulum, vacuole 31.55 31.4
CDX83212 Canola endoplasmic reticulum, extracellular 31.55 31.4
CDY04097 Canola endoplasmic reticulum, vacuole 30.58 30.88
CDY63067 Canola extracellular 31.55 30.81
CDY11065 Canola extracellular 29.61 30.65
CDY17457 Canola endoplasmic reticulum, vacuole 30.1 30.39
CDY25774 Canola endoplasmic reticulum, plastid 33.01 30.36
CDX76665 Canola plastid 27.67 30.16
CDY70934 Canola extracellular 29.61 29.9
CDY53010 Canola extracellular, plasma membrane 29.61 29.61
CDX91588 Canola extracellular 29.61 29.19
CDX80124 Canola extracellular, vacuole 29.13 29.13
CDY68609 Canola extracellular 28.64 28.92
CDY00484 Canola extracellular 28.64 28.92
CDY11451 Canola extracellular, plastid 26.21 28.57
CDY21423 Canola plastid 24.76 27.42
CDY36241 Canola endoplasmic reticulum, vacuole 28.16 27.36
CDY17658 Canola endoplasmic reticulum, vacuole 27.67 26.89
CDX89432 Canola extracellular 25.73 26.63
CDX94465 Canola extracellular 25.73 26.63
CDX89431 Canola extracellular 25.73 26.63
CDY11064 Canola extracellular 30.1 25.62
CDX94464 Canola extracellular 22.33 23.59
CDX89430 Canola extracellular 21.84 23.08
Protein Annotations
KEGG:00040+3.1.1.11KEGG:00500+3.1.1.11Gene3D:1.20.140.40MapMan:35.1GO:A0A078JDB7UniProt:A0A078JDB7
EnsemblPlants:CDY65618ProteinID:CDY65618ProteinID:CDY65618.1GO:GO:0003674GO:GO:0004857GO:GO:0008150
GO:GO:0030234GO:GO:0043086EnsemblPlantsGene:GSBRNA2T00046924001InterPro:IPR035513InterPro:Invertase/methylesterase_inhibPFAM:PF04043
PANTHER:PTHR31080PANTHER:PTHR31080:SF30MetaCyc:PWY-1081MetaCyc:PWY-7246MetaCyc:PWY-7248InterPro:Pectinesterase_inhib_dom
SMART:SM00856SUPFAM:SSF101148SignalP:SignalP-noTMTIGRFAMs:TIGR01614UniPathway:UPA00545UniParc:UPI0004EE739A
SEG:seg:::::
Description
BnaC02g46740DBnaC02g46740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDB7]
Coordinates
chrLK034863:-:21617..22301
Molecular Weight (calculated)
22992.1 Da
IEP (calculated)
10.778
GRAVY (calculated)
-0.072
Length
206 amino acids
Sequence
(BLAST)
001: MEPKLTHLCY CFLLFLPLLS QSAIANPSSS PNHSNSINFI VSSCRTTRYP TLCVKCLAAF ASKISRNENR LAQTALAVTL VRVRSTTAYV AKLTKARSVK
101: RREYLAVKDC VENLGDGLTM LAQSMREMKR VGRSGRGQQE FLWRLSNVET WVSAALTDET TCLDGFDGKF MDGVVKMAIR RRVVHVARVT SNALALVNRF
201: ASRHKS
Best Arabidopsis Sequence Match ( AT4G12390.1 )
(BLAST)
001: MEPKLTHLCY CLLLFLPLLC QSTIAKPSSS PNPSSSINFI VSSCRVTRYQ TLCVKCLAAF ADKIRRNENQ LAQTALAVTL VRVQSTTIYV GKLTKARRIK
101: RREYLAVKDC VENLGDGLEM LAQSMRELKQ VGRSGRDRDE FLWRLSNVET WVSAALTDET TCLDGFDGKV MDGVVKSAIR RRVVHVARVT SNALALVNRF
201: AARHKS
Arabidopsis Description
PME1Pectin methylesterase inhibitor 1 [Source:UniProtKB/TrEMBL;Acc:Q9STH2]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.