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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid

Predictor Summary:
  • nucleus 1
  • plastid 2
  • mitochondrion 1
  • endoplasmic reticulum 3
  • extracellular 1
  • vacuole 2
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plastid
Any Predictor:endoplasmic reticulum, nucleus, plastid, vacuole
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:plastid
WoLF PSORT:endoplasmic reticulum
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012366.1-P Field mustard endoplasmic reticulum, vacuole 91.96 98.56
CDY72606 Canola endoplasmic reticulum, extracellular 89.73 95.26
AT1G23205.1 Thale cress endoplasmic reticulum, vacuole 75.0 81.95
CDY21423 Canola plastid 65.18 78.49
CDY03725 Canola extracellular 54.91 61.19
CDY09473 Canola extracellular 54.46 60.4
CDX68333 Canola extracellular 53.57 56.87
CDY23485 Canola endoplasmic reticulum, extracellular 53.12 56.67
KRH41681 Soybean extracellular 48.21 50.47
KRH60383 Soybean extracellular 47.77 50.0
KRH38255 Soybean extracellular 44.64 48.08
CDY52024 Canola endoplasmic reticulum, extracellular 42.86 47.76
VIT_01s0011g05410.t01 Wine grape extracellular 43.75 47.34
CDX83999 Canola endoplasmic reticulum, extracellular, plastid 41.52 46.27
PGSC0003DMT400049198 Potato extracellular 42.86 45.71
CDY45298 Canola endoplasmic reticulum, extracellular 40.62 45.27
Solyc10g076730.1.1 Tomato extracellular 42.41 45.24
VIT_01s0011g05390.t01 Wine grape extracellular 42.41 43.98
CDY53526 Canola endoplasmic reticulum, extracellular 35.71 43.96
CDY48809 Canola endoplasmic reticulum, vacuole 37.5 40.58
CDY09429 Canola endoplasmic reticulum, vacuole 36.61 39.61
CDY17457 Canola endoplasmic reticulum, vacuole 35.71 39.22
CDY04097 Canola endoplasmic reticulum, vacuole 35.71 39.22
CDX92686 Canola cytosol, nucleus, plastid 15.18 39.08
CDX92687 Canola extracellular 32.14 35.82
CDY11066 Canola extracellular 31.7 35.32
GSMUA_Achr6P05900_001 Banana extracellular 32.14 34.95
CDY00278 Canola extracellular 31.7 34.8
CDX86904 Canola extracellular 31.7 34.8
GSMUA_Achr2P15160_001 Banana extracellular 30.8 34.5
CDX86708 Canola endoplasmic reticulum, vacuole 31.25 34.31
CDY52309 Canola endoplasmic reticulum, vacuole 31.25 34.31
CDX89429 Canola extracellular 30.36 33.83
CDX94463 Canola extracellular 30.36 33.83
CDY46918 Canola endoplasmic reticulum, extracellular 30.8 33.82
CDY70789 Canola extracellular 30.36 33.66
CDX99059 Canola extracellular 30.36 33.66
CDY30715 Canola endoplasmic reticulum, extracellular 29.91 33.33
CDY31839 Canola endoplasmic reticulum, extracellular 30.36 33.33
CDY11065 Canola extracellular 29.46 33.17
CDX87244 Canola plastid 29.46 33.17
CDY65618 Canola extracellular 30.36 33.01
CDY31841 Canola endoplasmic reticulum, extracellular 29.91 33.0
CDY16779 Canola plastid 29.02 32.66
CDY16561 Canola extracellular 28.57 32.65
CDY46921 Canola endoplasmic reticulum, extracellular 29.46 32.51
CDX97343 Canola endoplasmic reticulum, plasma membrane 29.46 32.04
CDY00484 Canola extracellular 28.57 31.37
CDY68609 Canola extracellular 28.57 31.37
CDY34685 Canola extracellular 28.57 31.07
CDY72130 Canola extracellular 28.12 31.03
CDY00279 Canola endoplasmic reticulum, extracellular 27.23 30.81
CDX86901 Canola endoplasmic reticulum, extracellular, plastid 27.23 30.5
GSMUA_Achr8P30920_001 Banana extracellular 26.79 30.3
CDX92436 Canola extracellular 27.23 30.05
CDX70942 Canola extracellular 27.23 29.9
CDX91588 Canola extracellular 27.68 29.67
CDX76665 Canola plastid 25.0 29.63
CDX89432 Canola extracellular 25.89 29.15
CDX89431 Canola extracellular 25.89 29.15
CDX94465 Canola extracellular 25.89 29.15
CDY70934 Canola extracellular 26.34 28.92
CDY36241 Canola endoplasmic reticulum, vacuole 27.23 28.77
CDY11451 Canola extracellular, plastid 24.11 28.57
CDY17658 Canola endoplasmic reticulum, vacuole 26.79 28.3
Os10t0185400-00 Rice extracellular 28.57 28.19
EES08718 Sorghum endoplasmic reticulum, plasma membrane, plastid 29.02 28.14
CDY11064 Canola extracellular 29.46 27.27
Zm00001d052935_P001 Maize mitochondrion 29.02 26.75
CDX80124 Canola extracellular, vacuole 24.11 26.21
CDY53010 Canola extracellular, plasma membrane 23.66 25.73
CDY21496 Canola endoplasmic reticulum, extracellular 23.66 25.6
CDX83212 Canola endoplasmic reticulum, extracellular 23.66 25.6
CDX89430 Canola extracellular 21.88 25.13
CDY63067 Canola extracellular 23.66 25.12
Zm00001d030035_P001 Maize endoplasmic reticulum, extracellular 24.55 25.11
TraesCS3D01G439800.1 Wheat plastid 25.0 24.78
CDX94464 Canola extracellular 20.98 24.1
OQU92294 Sorghum extracellular, plastid 23.66 23.45
TraesCS3B01G482700.1 Wheat plastid 23.66 23.45
TraesCS3A01G447100.1 Wheat extracellular, plasma membrane 23.66 23.35
EER94449 Sorghum plastid 22.77 23.29
Os10t0186200-00 Rice plasma membrane, plastid 21.43 19.75
Protein Annotations
KEGG:00040+3.1.1.11KEGG:00500+3.1.1.11Gene3D:1.20.140.40MapMan:35.1GO:A0A078GKH9UniProt:A0A078GKH9
EnsemblPlants:CDY25774ProteinID:CDY25774ProteinID:CDY25774.1ncoils:CoilGO:GO:0003674GO:GO:0004857
GO:GO:0005575GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0030234GO:GO:0043086
EnsemblPlantsGene:GSBRNA2T00033174001InterPro:IPR035513InterPro:Invertase/methylesterase_inhibPFAM:PF04043PANTHER:PTHR31080PANTHER:PTHR31080:SF10
MetaCyc:PWY-1081MetaCyc:PWY-7246MetaCyc:PWY-7248InterPro:Pectinesterase_inhib_domSMART:SM00856SUPFAM:SSF101148
TIGRFAMs:TIGR01614TMHMM:TMhelixUniPathway:UPA00545UniParc:UPI0004EEAF3CSEG:seg:
Description
BnaA07g10080DBnaA07g10080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GKH9]
Coordinates
chrLK032180:-:270445..271439
Molecular Weight (calculated)
24686.1 Da
IEP (calculated)
4.922
GRAVY (calculated)
-0.215
Length
224 amino acids
Sequence
(BLAST)
001: MSQESNTHRT EATMKKPSLH PSLIFFFFLT TLIPLILTVH SQPSSLPSDD SDFIRTSCNT TLYPDLCVSS LSNFSSSVHD DPALLARAAI SVTLSKALEL
101: GSYLSNVTAL LKSQEENGGH PTAAAVFHDC FENLKDAVDE MRGSMKQMRD LVSTGSLESF RFQMSNVQTW LSAALTDEET CTDGFKDVQD EPRKDEVCAR
201: VDDVKKLTSN ALALVNRCVD KAMH
Best Arabidopsis Sequence Match ( AT1G23205.1 )
(BLAST)
001: MKLSLHQPLL FFFLASVLPL ILTVHSQSDD SDFIRTSCNT TLYPDLCFSS LSSFSSSVHN DPALLARAAI SVTLTKTLDL ASYLANITTL QPESNEDGAH
101: HPTAAAVFHD CFDNLKDAVE EMKGSMKQMR ELVSTGSLES FRFQMSNVQT WLSAALTDEE TCTDGFKDIH DEPRKDDICA RVDDVKKMTS NALALVNRCV
201: DKAIH
Arabidopsis Description
At1g23205 [Source:UniProtKB/TrEMBL;Acc:O49297]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.