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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • plastid 2
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra027020.1-P Field mustard endoplasmic reticulum, extracellular 99.51 99.51
CDY31839 Canola endoplasmic reticulum, extracellular 98.04 98.04
AT1G62760.1 Thale cress plastid 78.43 51.28
VIT_00s0323g00060.t01 Wine grape endoplasmic reticulum, vacuole 45.1 45.77
CDY16779 Canola plastid 38.73 39.7
CDX87244 Canola plastid 38.73 39.7
CDY65618 Canola extracellular 39.71 39.32
CDX92687 Canola extracellular 38.73 39.3
CDX86708 Canola endoplasmic reticulum, vacuole 39.22 39.22
CDY11066 Canola extracellular 38.24 38.81
CDY52309 Canola endoplasmic reticulum, vacuole 38.73 38.73
CDX86901 Canola endoplasmic reticulum, extracellular, plastid 37.75 38.5
CDY00279 Canola endoplasmic reticulum, extracellular 37.25 38.38
CDX97343 Canola endoplasmic reticulum, plasma membrane 38.73 38.35
CDX86904 Canola extracellular 37.25 37.25
CDX99059 Canola extracellular 36.76 37.13
CDY46921 Canola endoplasmic reticulum, extracellular 36.76 36.95
CDY31841 Canola endoplasmic reticulum, extracellular 36.76 36.95
CDY34685 Canola extracellular 37.25 36.89
GSMUA_Achr1P04190_001 Banana extracellular 36.76 36.76
CDY00278 Canola extracellular 36.76 36.76
CDY16561 Canola extracellular 35.29 36.73
CDY70789 Canola extracellular 36.27 36.63
CDX94463 Canola extracellular 35.78 36.32
CDY30715 Canola endoplasmic reticulum, extracellular 35.29 35.82
CDX89429 Canola extracellular 35.29 35.82
CDX92686 Canola cytosol, nucleus, plastid 15.2 35.63
CDX92436 Canola extracellular 35.29 35.47
CDY72130 Canola extracellular 34.8 34.98
CDY03725 Canola extracellular 34.31 34.83
CDY09473 Canola extracellular 34.31 34.65
CDY52024 Canola endoplasmic reticulum, extracellular 33.82 34.33
CDX70942 Canola extracellular 34.31 34.31
CDY11065 Canola extracellular 33.33 34.17
GSMUA_Achr5P19900_001 Banana endoplasmic reticulum, vacuole 34.8 33.97
CDY45298 Canola endoplasmic reticulum, extracellular 33.33 33.83
CDX83999 Canola endoplasmic reticulum, extracellular, plastid 32.84 33.33
CDY72606 Canola endoplasmic reticulum, extracellular 34.31 33.18
CDY17457 Canola endoplasmic reticulum, vacuole 32.84 32.84
CDY68609 Canola extracellular 32.84 32.84
CDY00484 Canola extracellular 32.84 32.84
CDY48809 Canola endoplasmic reticulum, vacuole 32.84 32.37
CDY09429 Canola endoplasmic reticulum, vacuole 32.84 32.37
CDY04097 Canola endoplasmic reticulum, vacuole 32.35 32.35
GSMUA_Achr4P24680_001 Banana endoplasmic reticulum, mitochondrion, plastid, vacuole 33.82 31.8
CDX94465 Canola extracellular 30.88 31.66
CDX89432 Canola extracellular 30.88 31.66
CDX89431 Canola extracellular 30.88 31.66
CDX91588 Canola extracellular 32.35 31.58
CDY70934 Canola extracellular 31.37 31.37
CDY21423 Canola plastid 28.43 31.18
TraesCS1D01G178200.1 Wheat extracellular 32.84 31.16
CDY23485 Canola endoplasmic reticulum, extracellular 31.86 30.95
CDX68333 Canola extracellular 31.86 30.81
CDY25774 Canola endoplasmic reticulum, plastid 33.82 30.8
Zm00001d032495_P001 Maize extracellular 32.84 30.59
CDY53526 Canola endoplasmic reticulum, extracellular 26.96 30.22
TraesCS1A01G180000.1 Wheat extracellular 31.37 29.91
TraesCS1B01G200600.1 Wheat extracellular 30.88 29.58
CDY21496 Canola endoplasmic reticulum, extracellular 29.41 28.99
CDY53010 Canola extracellular, plasma membrane 28.92 28.64
CDX83212 Canola endoplasmic reticulum, extracellular 28.92 28.5
CDX89430 Canola extracellular 26.96 28.21
CDX80124 Canola extracellular, vacuole 28.43 28.16
CDY11064 Canola extracellular 33.33 28.1
Os10t0508700-01 Rice extracellular 29.41 28.04
EER91394 Sorghum extracellular, plasma membrane 30.39 27.8
CDX94464 Canola extracellular 26.47 27.69
CDY63067 Canola extracellular 28.43 27.49
HORVU1Hr1G047710.1 Barley extracellular, mitochondrion, plasma membrane 30.39 27.19
CDX76665 Canola plastid 25.0 26.98
EER91393 Sorghum extracellular 31.37 26.78
CDY11451 Canola extracellular, plastid 24.51 26.45
CDY36241 Canola endoplasmic reticulum, vacuole 24.02 23.11
CDY17658 Canola endoplasmic reticulum, vacuole 23.53 22.64
Protein Annotations
KEGG:00040+3.1.1.11KEGG:00500+3.1.1.11Gene3D:1.20.140.40MapMan:35.1GO:A0A078ICD6UniProt:A0A078ICD6
EnsemblPlants:CDY46918ProteinID:CDY46918ProteinID:CDY46918.1GO:GO:0003674GO:GO:0004857GO:GO:0008150
GO:GO:0030234GO:GO:0043086EnsemblPlantsGene:GSBRNA2T00086391001InterPro:IPR035513InterPro:Invertase/methylesterase_inhibPFAM:PF04043
PANTHER:PTHR31080PANTHER:PTHR31080:SF8MetaCyc:PWY-1081MetaCyc:PWY-7246MetaCyc:PWY-7248InterPro:Pectinesterase_inhib_dom
SMART:SM00856SUPFAM:SSF101148SignalP:SignalP-noTMTIGRFAMs:TIGR01614TMHMM:TMhelixUniPathway:UPA00545
UniParc:UPI0004EEAF14SEG:seg::::
Description
BnaA09g12760DBnaA09g12760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ICD6]
Coordinates
chrLK032690:-:106016..106630
Molecular Weight (calculated)
22369.6 Da
IEP (calculated)
5.278
GRAVY (calculated)
-0.026
Length
204 amino acids
Sequence
(BLAST)
001: MKTLSQIEII FLSIALLLFI TSSATPSTYS NQTNLDYIKT SCNLTHYKTL CYISLSPYAL KIDSNPQRLA VTALNLTLSS ANSAAKFIKN IPHGRGGLTR
101: FEAGAVADCV EEIGDSVSEL QDSIRELESI NYEDSSKFEM VMSDVETWVS AALTDDDTCM DGFGQDGRAK AVVKDLVRRH VVKVARLTSN ALAVINMYAS
201: THEK
Best Arabidopsis Sequence Match ( AT1G62760.1 )
(BLAST)
001: MNILSQTQIL HLSIAILLFI TTSSSSLSPS SSSPSLSPSP PSSSPSSAPP SSLSPSSPPP LSLSPSSPPP PPPSSSPLSS LSPSLSPSPP SSSPSSAPPS
101: SLSPSSPPPL SLSPSSPPPP PPSSSPLSSL SPSSSSSTYS NQTNLDYIKT SCNITLYKTI CYNSLSPYAS TIRSNPQKLA VIALNLTLSS AKSASKFVKN
201: ISHGGGLTRL EVVAVADCVE EIGDSVTSLQ DSIRELDSIN YKDSAKFEMV MSDVETWVSA ALTNDDTCMD GFSLVKTAVK DLVRRHVVEV ARLTSNALAL
301: INMYASTQEN FS
Arabidopsis Description
PMEI10Pectinesterase inhibitor 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SI74]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.