Factsheet for TraesCS1A01G180000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G200600.1	Wheat	extracellular	94.86	95.31
TraesCS1D01G178200.1	Wheat	extracellular	95.33	94.88
HORVU1Hr1G047710.1	Barley	extracellular, mitochondrion, plasma membrane	92.52	86.84
Os10t0508700-01	Rice	extracellular	63.08	63.08
EER91393	Sorghum	extracellular	67.29	60.25
EER91394	Sorghum	extracellular, plasma membrane	62.15	59.64
Zm00001d032495_P001	Maize	extracellular	58.88	57.53
GSMUA_Achr5P19900_001	Banana	endoplasmic reticulum, vacuole	35.51	36.36
VIT_16s0022g00890.t01	Wine grape	plastid	25.23	34.62
VIT_16s0022g00860.t01	Wine grape	extracellular	32.24	34.33
GSMUA_Achr1P04190_001	Banana	extracellular	32.71	34.31
VIT_00s0323g00070.t01	Wine grape	endoplasmic reticulum, extracellular	32.24	33.82
VIT_16s0022g00830.t01	Wine grape	endoplasmic reticulum, extracellular	31.78	33.66
VIT_16s0022g00840.t01	Wine grape	endoplasmic reticulum, extracellular	31.78	33.66
Bra010076.1-P	Field mustard	endoplasmic reticulum, extracellular	29.91	32.32
CDY00279	Canola	endoplasmic reticulum, extracellular	29.91	32.32
CDX87244	Canola	plastid	29.91	32.16
AT5G62360.1	Thale cress	endoplasmic reticulum, extracellular, plastid	30.37	32.02
KRH39988	Soybean	endoplasmic reticulum, extracellular	30.84	31.88
PGSC0003DMT400072092	Potato	endoplasmic reticulum, extracellular, vacuole	29.44	31.82
CDY16779	Canola	plastid	29.44	31.66
Bra035897.1-P	Field mustard	plastid	29.44	31.66
CDX86901	Canola	endoplasmic reticulum, extracellular, plastid	29.44	31.5
CDY46918	Canola	endoplasmic reticulum, extracellular	29.91	31.37
Bra027020.1-P	Field mustard	endoplasmic reticulum, extracellular	29.91	31.37
VIT_16s0022g00870.t01	Wine grape	endoplasmic reticulum, extracellular	28.97	31.0
Solyc03g083770.1.1	Tomato	nucleus	28.97	31.0
Solyc03g083660.1.1	Tomato	endoplasmic reticulum, extracellular	28.04	30.93
CDY31839	Canola	endoplasmic reticulum, extracellular	29.44	30.88
Solyc03g083710.1.1	Tomato	nucleus	28.04	30.77
PGSC0003DMT400031359	Potato	endoplasmic reticulum, extracellular	27.57	30.57
PGSC0003DMT400031362	Potato	extracellular	28.97	30.54
Solyc03g083730.1.1	Tomato	nucleus	28.5	30.35
VIT_00s0323g00060.t01	Wine grape	endoplasmic reticulum, vacuole	28.5	30.35
PGSC0003DMT400031363	Potato	plastid	28.5	30.35
KRH23798	Soybean	plastid	28.5	30.2
TraesCS7A01G406500.1	Wheat	extracellular, golgi	28.04	29.27
TraesCS2A01G036100.1	Wheat	extracellular	28.97	29.25
Solyc03g083720.1.1	Tomato	endoplasmic reticulum, plastid	28.04	28.71
PGSC0003DMT400028042	Potato	endoplasmic reticulum, extracellular	27.57	28.23
PGSC0003DMT400028038	Potato	endoplasmic reticulum, extracellular	25.23	27.98
VIT_16s0022g00940.t01	Wine grape	plastid	26.17	26.54
CDY11065	Canola	extracellular	24.3	26.13
PGSC0003DMT400071010	Potato	extracellular	23.83	26.02
Solyc11g019910.1.1	Tomato	extracellular	23.83	26.02
Bra019180.1-P	Field mustard	extracellular	23.83	25.63
Bra028261.1-P	Field mustard	cytosol, plastid	20.09	25.44
AT4G25250.1	Thale cress	extracellular	22.9	24.62
TraesCS3A01G447100.1	Wheat	extracellular, plasma membrane	25.7	24.23
CDX92686	Canola	cytosol, nucleus, plastid	9.81	24.14
KRH39989	Soybean	mitochondrion	23.36	23.81
Solyc03g083700.1.1	Tomato	endoplasmic reticulum, extracellular	21.03	23.68
CDX91588	Canola	extracellular	22.9	23.45
Bra013878.1-P	Field mustard	plastid	16.36	23.33
CDY00484	Canola	extracellular	21.5	22.55
CDY70934	Canola	extracellular	21.5	22.55
CDY68609	Canola	extracellular	21.5	22.55
CDX94465	Canola	extracellular	20.56	22.11
CDX89432	Canola	extracellular	20.56	22.11
AT5G51520.1	Thale cress	extracellular	21.03	22.06
Bra013879.1-P	Field mustard	plastid	15.42	22.0
CDX89431	Canola	extracellular	20.09	21.61
CDX94464	Canola	extracellular	19.63	21.54
KRH23797	Soybean	plastid	21.03	21.03
CDX89430	Canola	extracellular	19.16	21.03
KRH56360	Soybean	extracellular	22.43	20.87
CDY11064	Canola	extracellular	23.36	20.66
KRH62604	Soybean	endoplasmic reticulum, extracellular	21.5	20.18
AT1G62760.1	Thale cress	plastid	28.5	19.55
PGSC0003DMT400028039	Potato	extracellular	25.7	16.27

Protein Annotations

EnsemblPlants:TraesCS1A01G180000.1	EnsemblPlantsGene:TraesCS1A01G180000	Gene3D:1.20.140.40	GO:GO:0003674	GO:GO:0004857	GO:GO:0008150
GO:GO:0030234	InterPro:IPR035513	InterPro:Invertase/methylesterase_inhib	InterPro:Pectinesterase_inhib_dom	PANTHER:PTHR31080	PANTHER:PTHR31080:SF13
PFAM:PF04043	SEG:seg	SignalP:SignalP-noTM	SMART:SM00856	SUPFAM:SSF101148	TIGR:cd15798
TIGRFAMs:TIGR01614	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:325032422..325033066

Molecular Weight (calculated)

21444.7 Da

IEP (calculated)

6.720

GRAVY (calculated)

0.300

Length

214 amino acids

Sequence
(BLAST)

001: MARTVGCLWL LLSCWCGLAA AARPAAPSAA AGVGGGNNAS FVKAWCAGTE YPALCDATLS PYAAAVGDSP ARLACAALNV TLAGARNATA AMRGMAAARR
101: LPTVAAEAAG DCVSMLGDAV GMLRQSVEAM AQVGAEAEQG HPQERTVRFQ VDSVRTWASA ALTDGDMCME GFRGEAAGGG GVREAVRGHV AGLLHLTANA
201: LCIVGAMANQ TAPP

Best Arabidopsis Sequence Match ( AT5G62350.1 )
(BLAST)

001: MAKQYLFVLL SISYLLSLEL TAATAASQTG ASKKAINFIQ SSCKTTTYPA LCVHSLSVYA NDIQTSPKRL AETAIAVTLS RAQSTKLFVS RLTRMKGLKK
101: REVEAIKDCV EEMNDTVDRL TKSVQELKLC GSAKDQDQFA YHMSNAQTWT SAALTDENTC SDGFSGRVMD GRIKNSVRAR IMNVGHETSN ALSLINAFAK
201: TY

Arabidopsis Description

Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LVA4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.