Factsheet for TraesCS1B01G200600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G180000.1	Wheat	extracellular	95.31	94.86
TraesCS1D01G178200.1	Wheat	extracellular	93.43	92.56
HORVU1Hr1G047710.1	Barley	extracellular, mitochondrion, plasma membrane	91.55	85.53
Os10t0508700-01	Rice	extracellular	62.44	62.15
EER91394	Sorghum	extracellular, plasma membrane	61.97	59.19
EER91393	Sorghum	extracellular	65.73	58.58
Zm00001d032495_P001	Maize	extracellular	59.62	57.99
GSMUA_Achr5P19900_001	Banana	endoplasmic reticulum, vacuole	35.21	35.89
VIT_16s0022g00860.t01	Wine grape	extracellular	33.33	35.32
VIT_16s0022g00840.t01	Wine grape	endoplasmic reticulum, extracellular	32.86	34.65
VIT_16s0022g00830.t01	Wine grape	endoplasmic reticulum, extracellular	32.86	34.65
VIT_16s0022g00890.t01	Wine grape	plastid	24.88	33.97
GSMUA_Achr1P04190_001	Banana	extracellular	31.92	33.33
Bra010076.1-P	Field mustard	endoplasmic reticulum, extracellular	30.52	32.83
CDY00279	Canola	endoplasmic reticulum, extracellular	30.52	32.83
AT5G62360.1	Thale cress	endoplasmic reticulum, extracellular, plastid	30.99	32.51
VIT_00s0323g00070.t01	Wine grape	endoplasmic reticulum, extracellular	30.99	32.35
PGSC0003DMT400072092	Potato	endoplasmic reticulum, extracellular, vacuole	30.05	32.32
CDX87244	Canola	plastid	30.05	32.16
CDY16779	Canola	plastid	30.05	32.16
Bra035897.1-P	Field mustard	plastid	30.05	32.16
Solyc03g083770.1.1	Tomato	nucleus	30.05	32.0
CDX86901	Canola	endoplasmic reticulum, extracellular, plastid	30.05	32.0
KRH39988	Soybean	endoplasmic reticulum, extracellular	30.99	31.88
VIT_16s0022g00870.t01	Wine grape	endoplasmic reticulum, extracellular	29.58	31.5
PGSC0003DMT400031363	Potato	plastid	29.58	31.34
Solyc03g083730.1.1	Tomato	nucleus	29.58	31.34
KRH23798	Soybean	plastid	29.58	31.19
PGSC0003DMT400031359	Potato	endoplasmic reticulum, extracellular	28.17	31.09
PGSC0003DMT400031362	Potato	extracellular	29.58	31.03
CDY46918	Canola	endoplasmic reticulum, extracellular	29.58	30.88
Bra027020.1-P	Field mustard	endoplasmic reticulum, extracellular	29.58	30.88
CDY31839	Canola	endoplasmic reticulum, extracellular	29.11	30.39
Solyc03g083660.1.1	Tomato	endoplasmic reticulum, extracellular	27.23	29.9
VIT_00s0323g00060.t01	Wine grape	endoplasmic reticulum, vacuole	28.17	29.85
Solyc03g083710.1.1	Tomato	nucleus	26.76	29.23
TraesCS7B01G306500.1	Wheat	extracellular, golgi	27.7	28.92
Solyc03g083720.1.1	Tomato	endoplasmic reticulum, plastid	27.7	28.23
PGSC0003DMT400028042	Potato	endoplasmic reticulum, extracellular	27.23	27.75
TraesCS2B01G049000.1	Wheat	extracellular	27.7	27.7
PGSC0003DMT400028038	Potato	endoplasmic reticulum, extracellular	23.94	26.42
VIT_16s0022g00940.t01	Wine grape	plastid	25.35	25.59
CDY11065	Canola	extracellular	23.0	24.62
Solyc11g019910.1.1	Tomato	extracellular	22.54	24.49
PGSC0003DMT400071010	Potato	extracellular	22.54	24.49
Bra028261.1-P	Field mustard	cytosol, plastid	19.25	24.26
CDX92686	Canola	cytosol, nucleus, plastid	9.86	24.14
Bra019180.1-P	Field mustard	extracellular	22.54	24.12
TraesCS3B01G482700.1	Wheat	plastid	25.35	23.89
Solyc03g083700.1.1	Tomato	endoplasmic reticulum, extracellular	20.66	23.16
AT4G25250.1	Thale cress	extracellular	21.6	23.12
KRH39989	Soybean	mitochondrion	22.54	22.86
Bra013878.1-P	Field mustard	plastid	15.96	22.67
CDX91588	Canola	extracellular	21.13	21.53
Bra013879.1-P	Field mustard	plastid	15.02	21.33
CDX89432	Canola	extracellular	19.72	21.11
CDX94465	Canola	extracellular	19.72	21.11
CDY70934	Canola	extracellular	20.19	21.08
CDY68609	Canola	extracellular	20.19	21.08
CDY00484	Canola	extracellular	20.19	21.08
CDX94464	Canola	extracellular	19.25	21.03
CDX89431	Canola	extracellular	19.25	20.6
AT5G51520.1	Thale cress	extracellular	19.72	20.59
CDX89430	Canola	extracellular	18.78	20.51
KRH23797	Soybean	plastid	20.19	20.09
KRH56360	Soybean	extracellular	21.6	20.0
CDY11064	Canola	extracellular	22.07	19.42
KRH62604	Soybean	endoplasmic reticulum, extracellular	20.66	19.3
AT1G62760.1	Thale cress	plastid	28.17	19.23
PGSC0003DMT400028039	Potato	extracellular	24.41	15.38

Protein Annotations

EnsemblPlants:TraesCS1B01G200600.1	EnsemblPlantsGene:TraesCS1B01G200600	Gene3D:1.20.140.40	GO:GO:0003674	GO:GO:0004857	GO:GO:0008150
GO:GO:0030234	InterPro:IPR035513	InterPro:Invertase/methylesterase_inhib	InterPro:Pectinesterase_inhib_dom	PANTHER:PTHR31080	PANTHER:PTHR31080:SF13
PFAM:PF04043	SEG:seg	SignalP:SignalP-noTM	SMART:SM00856	SUPFAM:SSF101148	TIGR:cd15798
TIGRFAMs:TIGR01614	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr1B:-:359224980..359225621

Molecular Weight (calculated)

21391.7 Da

IEP (calculated)

5.662

GRAVY (calculated)

0.345

Length

213 amino acids

Sequence
(BLAST)

001: MARTVGCLWL LLSCWCGLAV AARPAALSAA AGTGGGNNAS FVRAWCAGTE YPALCDATLS PYAAAVGDSP ARLACAALNV TLAGVRNATA AMRGMVAGRL
101: PPVAAEAAGD CVSMLGDAVG MLRQSVEAMA QVGAEAEQGH SQERTVRFQV DSVRTWASAA LTDGDMCMEG FRGEAAGGGG VREAVRGHVA GLLHLTANAL
201: CIVGAMANET APP

Best Arabidopsis Sequence Match ( AT5G62360.1 )
(BLAST)

001: MGESFRLFNH HHFLTTFLII IAMLKLVHTT TTTTTTTTTN TEFVKSSCTF TTYPRLCFSS LSTHASLIQT SPKLMAHAAL NITLASAKVT SAMMVRLSNS
101: RLKPKEVSAM RDCVEELGDT LEELRKSIGE MCQLSGSNYE VYISDIQTWV SAALTDVNTC TDGFEGEDMD GKVKVLVRGR ILVIAHLTSN ALALINHFAS
201: IHG

Arabidopsis Description

Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LVA3]
SUBAcon: [endoplasmic reticulum,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.