Factsheet for VIT_16s0022g00890.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 3
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400028042	Potato	endoplasmic reticulum, extracellular	61.54	45.93
Solyc03g083720.1.1	Tomato	endoplasmic reticulum, plastid	61.54	45.93
VIT_00s0323g00060.t01	Wine grape	endoplasmic reticulum, vacuole	51.28	39.8
GSMUA_Achr5P19900_001	Banana	endoplasmic reticulum, vacuole	52.56	39.23
VIT_16s0022g00960.t01	Wine grape	extracellular, vacuole	49.36	38.89
VIT_16s0022g00860.t01	Wine grape	extracellular	50.0	38.81
GSMUA_Achr1P04190_001	Banana	extracellular	50.64	38.73
VIT_00s0323g00070.t01	Wine grape	endoplasmic reticulum, extracellular	50.64	38.73
VIT_00s0323g00050.t01	Wine grape	extracellular	49.36	38.69
VIT_16s0022g00840.t01	Wine grape	endoplasmic reticulum, extracellular	49.36	38.12
VIT_16s0022g00830.t01	Wine grape	endoplasmic reticulum, extracellular	49.36	38.12
VIT_16s0022g00870.t01	Wine grape	endoplasmic reticulum, extracellular	48.08	37.5
GSMUA_Achr4P24680_001	Banana	endoplasmic reticulum, mitochondrion, plastid, vacuole	50.0	35.94
VIT_16s0022g00940.t01	Wine grape	plastid	45.51	33.65
VIT_11s0016g00590.t01	Wine grape	extracellular	39.1	32.45
VIT_01s0011g05410.t01	Wine grape	extracellular	40.38	30.43
VIT_07s0005g00480.t01	Wine grape	extracellular	37.18	29.59
VIT_01s0011g05390.t01	Wine grape	extracellular	38.46	27.78
TraesCS1D01G178200.1	Wheat	extracellular	35.26	25.58
TraesCS1A01G180000.1	Wheat	extracellular	34.62	25.23
TraesCS1B01G200600.1	Wheat	extracellular	33.97	24.88
Os10t0508700-01	Rice	extracellular	33.33	24.3
EER91393	Sorghum	extracellular	37.18	24.27
Zm00001d032495_P001	Maize	extracellular	33.97	24.2
HORVU1Hr1G047710.1	Barley	extracellular, mitochondrion, plasma membrane	34.62	23.68
EER91394	Sorghum	extracellular, plasma membrane	32.05	22.42

Protein Annotations

Gene3D:1.20.140.40	EntrezGene:100258792	wikigene:100258792	MapMan:35.1	EMBL:AM430805	ProteinID:CAN82390
ProteinID:CAN82390.1	ProteinID:CCB49314	ProteinID:CCB49314.1	ncoils:Coil	UniProt:F6HAN4	EMBL:FN595506
GO:GO:0003674	GO:GO:0004857	GO:GO:0008150	GO:GO:0030234	GO:GO:0043086	InterPro:IPR035513
InterPro:Invertase/methylesterase_inhib	EntrezGene:LOC100258792	wikigene:LOC100258792	PFAM:PF04043	PANTHER:PTHR31080	PANTHER:PTHR31080:SF28
InterPro:Pectinesterase_inhib_dom	SMART:SM00856	SUPFAM:SSF101148	TIGR:TC59405	TIGRFAMs:TIGR01614	UniParc:UPI0002108D42
ArrayExpress:VIT_16s0022g00890	EnsemblPlantsGene:VIT_16s0022g00890	EnsemblPlants:VIT_16s0022g00890.t01	unigene:Vvi.13940	RefSeq:XP_002263715	RefSeq:XP_002263715.1

Description

No Description!

Coordinates

chr16:+:12473080..12473856

Molecular Weight (calculated)

16883.3 Da

IEP (calculated)

5.724

GRAVY (calculated)

-0.040

Length

156 amino acids

Sequence
(BLAST)

001: MYPKLCFKTL SAYASTIQTS HMELANAALC VSLKGAQSSS NKVLKLSKGQ GLSRREAAAI TDCIENMQDS VDELQQSLVA MKDLQGPDFQ MKMSDIVTWV
101: SAALTDEDTC MDGFAEHAMK GDLKSTIRSN IVSVAQLTSN ALAIINKFLS IQGNQL

Best Arabidopsis Sequence Match ( AT4G25260.1 )
(BLAST)

001: MARNFELSLI LFVLYLSTAA IVMARNLEEE SSGDTEFIKA SCETTSYPDR CFQSLSSYAS EIKKQPRKLA ETALAVSIAR AKSAKTYVSE MTDYKGITKR
101: QHEAVADCLE EMGDTVDRLS NSLKELKHLE EGDSGEDFWF CLSNVRTWTS AALTDETACM DGFGGKAMAG ELKSLIRTHI VSVAEETSNA LALINDFASK
201: H

Arabidopsis Description

PMEI7Pectinesterase inhibitor 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SB37]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.