Factsheet for VIT_11s0016g00590.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400035274	Potato	extracellular	59.57	59.26
Bra006573.1-P	Field mustard	cytosol	30.85	59.18
Solyc07g042390.1.1	Tomato	nucleus	58.51	58.82
CDY16561	Canola	extracellular	54.79	52.55
Bra002328.1-P	Field mustard	extracellular	56.38	52.22
CDY72130	Canola	extracellular	56.38	52.22
Solyc12g009270.1.1	Tomato	nucleus	51.6	51.87
CDX92436	Canola	extracellular	55.85	51.72
CDX70942	Canola	extracellular	55.85	51.47
PGSC0003DMT400007510	Potato	extracellular	52.13	50.52
KRH12602	Soybean	extracellular	55.85	48.61
KRH02570	Soybean	extracellular	51.6	47.32
KRH37544	Soybean	endoplasmic reticulum, extracellular	53.19	46.73
AT5G20740.2	Thale cress	endoplasmic reticulum, extracellular, plastid	56.91	44.77
VIT_16s0022g00890.t01	Wine grape	plastid	32.45	39.1
VIT_00s0323g00050.t01	Wine grape	extracellular	38.83	36.68
VIT_16s0022g00870.t01	Wine grape	endoplasmic reticulum, extracellular	36.17	34.0
VIT_00s0323g00060.t01	Wine grape	endoplasmic reticulum, vacuole	36.17	33.83
VIT_07s0005g00480.t01	Wine grape	extracellular	35.11	33.67
VIT_00s0323g00070.t01	Wine grape	endoplasmic reticulum, extracellular	35.11	32.35
VIT_16s0022g00960.t01	Wine grape	extracellular, vacuole	34.04	32.32
VIT_16s0022g00840.t01	Wine grape	endoplasmic reticulum, extracellular	34.04	31.68
VIT_16s0022g00830.t01	Wine grape	endoplasmic reticulum, extracellular	34.04	31.68
VIT_01s0011g05410.t01	Wine grape	extracellular	34.57	31.4
VIT_16s0022g00860.t01	Wine grape	extracellular	33.51	31.34
VIT_16s0022g00940.t01	Wine grape	plastid	35.11	31.28
VIT_01s0011g05390.t01	Wine grape	extracellular	32.98	28.7

Protein Annotations

Gene3D:1.20.140.40	EntrezGene:100267888	wikigene:100267888	MapMan:35.1	ProteinID:CCB51374	ProteinID:CCB51374.1
ncoils:Coil	UniProt:F6HGM6	EMBL:FN595756	GO:GO:0003674	GO:GO:0004857	GO:GO:0008150
GO:GO:0030234	GO:GO:0043086	InterPro:IPR035513	InterPro:Invertase/methylesterase_inhib	EntrezGene:LOC100267888	wikigene:LOC100267888
PFAM:PF04043	PANTHER:PTHR31080	PANTHER:PTHR31080:SF26	InterPro:Pectinesterase_inhib_dom	SMART:SM00856	SUPFAM:SSF101148
SignalP:SignalP-noTM	TIGR:TC53084	TIGRFAMs:TIGR01614	UniParc:UPI00021081E1	ArrayExpress:VIT_11s0016g00590	EnsemblPlantsGene:VIT_11s0016g00590
EnsemblPlants:VIT_11s0016g00590.t01	unigene:Vvi.30	RefSeq:XP_002276089	RefSeq:XP_002276089.1	:	:

Description

No Description!

Coordinates

chr11:+:583486..584257

Molecular Weight (calculated)

20399.3 Da

IEP (calculated)

8.937

GRAVY (calculated)

-0.148

Length

188 amino acids

Sequence
(BLAST)

001: MALPPLFAVV FVLATLSSTF AEDLVHSSCI HASYPNICLR TLSSYSGPAK TPRDLAQAAV KVSLSRAQRV STYLNGVAGQ GKASKREQVA LSDCVEQISD
101: TVEELSNTLK ELKHLRPGTF RWQMSNAETW VSAALTNEDT CLDGFQGVDG KVKADVKRKI TNVARVTSNA LYLINRLDST RGRAGLEP

Best Arabidopsis Sequence Match ( AT5G20740.1 )
(BLAST)

001: MAPTQNLFLV AIAFAVIFTA STVHGRHNGA EDIVHSSCEH ASYPSLCVRT LSSYSGPTIT NRRDLAQAAI KISLSHAQSA AKKLAVVRDS VGKKKQEKAA
101: LVDCVEMIGD SVDELSRTLG VLKHLRVSGG SAKEFRWQMS NAQTWASAAL TDDDTCLDGF QGMDDGEIKT EVKQWMTKVA RVTSNALYMV NQLDETRGKP
201: HDVHL

Arabidopsis Description

Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:TAIR;Acc:AT5G20740]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.