Factsheet for VIT_16s0022g00960.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 3
extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400028031	Potato	extracellular	59.6	60.2
VIT_00s0323g00050.t01	Wine grape	extracellular	60.1	59.8
PGSC0003DMT400055550	Potato	extracellular	55.56	57.29
Solyc06g034370.1.1	Tomato	extracellular	54.55	56.25
KRH62602	Soybean	nucleus	52.53	53.89
AT5G62350.1	Thale cress	extracellular	54.04	52.97
KRH56361	Soybean	plastid	52.02	52.02
CDX89429	Canola	extracellular	52.53	51.74
Bra013881.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	52.53	51.49
AT4G25260.1	Thale cress	endoplasmic reticulum, extracellular	52.02	51.24
CDX94463	Canola	extracellular	52.02	51.24
CDX86904	Canola	extracellular	52.53	50.98
Bra018157.1-P	Field mustard	plastid	47.47	50.81
CDX92687	Canola	extracellular	51.52	50.75
CDY11066	Canola	extracellular	51.01	50.25
Bra019179.1-P	Field mustard	extracellular	51.01	50.25
CDY00278	Canola	extracellular	51.52	50.0
Bra010075.1-P	Field mustard	extracellular	51.52	50.0
VIT_16s0022g00890.t01	Wine grape	plastid	38.89	49.36
CDX99059	Canola	extracellular	48.99	48.02
AT3G47380.1	Thale cress	extracellular	48.99	48.02
CDY70789	Canola	extracellular	48.48	47.52
GSMUA_Achr11P...	Banana	extracellular	39.9	47.31
Bra029267.1-P	Field mustard	endoplasmic reticulum, extracellular	47.98	47.26
CDY30715	Canola	endoplasmic reticulum, extracellular	47.98	47.26
GSMUA_Achr3P26730_001	Banana	extracellular	40.4	46.24
GSMUA_Achr1P00870_001	Banana	extracellular	38.38	45.24
VIT_00s0323g00060.t01	Wine grape	endoplasmic reticulum, vacuole	43.94	43.28
GSMUA_Achr8P12460_001	Banana	extracellular	36.87	42.94
Os06t0711800-01	Rice	extracellular	42.93	42.5
VIT_00s0323g00070.t01	Wine grape	endoplasmic reticulum, extracellular	43.43	42.16
KXG20844	Sorghum	extracellular	42.93	42.08
VIT_16s0022g00860.t01	Wine grape	extracellular	41.92	41.29
TraesCS7B01G306500.1	Wheat	extracellular, golgi	42.42	41.18
VIT_16s0022g00840.t01	Wine grape	endoplasmic reticulum, extracellular	41.92	41.09
VIT_16s0022g00830.t01	Wine grape	endoplasmic reticulum, extracellular	41.92	41.09
GSMUA_Achr5P12890_001	Banana	endoplasmic reticulum	37.37	40.66
TraesCS7A01G406500.1	Wheat	extracellular, golgi	41.92	40.49
TraesCS7D01G400200.1	Wheat	extracellular, golgi	41.41	40.2
KXG20845	Sorghum	extracellular	43.94	40.09
VIT_16s0022g00870.t01	Wine grape	endoplasmic reticulum, extracellular	40.4	40.0
Zm00001d014757_P001	Maize	extracellular, vacuole	41.92	38.78
HORVU7Hr1G095080.4	Barley	mitochondrion, plastid	39.9	38.73
Zm00001d036431_P001	Maize	extracellular	42.42	38.01
VIT_16s0022g00940.t01	Wine grape	plastid	39.9	37.44
Os04t0106000-01	Rice	extracellular	31.31	35.03
VIT_01s0011g05410.t01	Wine grape	extracellular	36.36	34.78
VIT_11s0016g00590.t01	Wine grape	extracellular	32.32	34.04
EES11737	Sorghum	extracellular	34.85	32.24
Zm00001d024913_P001	Maize	extracellular	32.83	32.02
VIT_01s0011g05390.t01	Wine grape	extracellular	34.85	31.94
VIT_07s0005g00480.t01	Wine grape	extracellular	31.31	31.63
TraesCS2D01G035100.1	Wheat	extracellular	32.83	30.52
TraesCS2A01G036100.1	Wheat	extracellular	32.32	30.19
TraesCS2B01G049000.1	Wheat	extracellular	31.31	29.11

Protein Annotations

Gene3D:1.20.140.40	EntrezGene:100232884	wikigene:100232884	MapMan:35.1	ProteinID:AGB13718	ProteinID:AGB13718.1
EMBL:AJ237985	EMBL:AM470057	ProteinID:CAB85625	ProteinID:CAB85625.1	ProteinID:CAN79279	ProteinID:CAN79279.1
ProteinID:CBI24569	ProteinID:CBI24569.3	ncoils:Coil	EMBL:FN595506	GO:GO:0003674	GO:GO:0004857
GO:GO:0008150	GO:GO:0030234	GO:GO:0043086	EntrezGene:GRIP28	wikigene:GRIP28	InterPro:IPR035513
InterPro:Invertase/methylesterase_inhib	EMBL:KC339523	RefSeq:NP_001268141.1	PFAM:PF04043	PANTHER:PTHR31080	PANTHER:PTHR31080:SF31
InterPro:Pectinesterase_inhib_dom	UniProt:Q9M4H8	SMART:SM00856	SUPFAM:SSF101148	SignalP:SignalP-noTM	TIGR:TC63758
TIGR:TC64569	TIGRFAMs:TIGR01614	UniParc:UPI00000A181A	ArrayExpress:VIT_16s0022g00960	EnsemblPlantsGene:VIT_16s0022g00960	EnsemblPlants:VIT_16s0022g00960.t01
unigene:Vvi.6574	SEG:seg	:	:	:	:

Description

Putative pectin methylesterase inhibitor [Source:UniProtKB/TrEMBL;Acc:Q9M4H8]

Coordinates

chr16:-:12517766..12518431

Molecular Weight (calculated)

21129.4 Da

IEP (calculated)

9.554

GRAVY (calculated)

0.092

Length

198 amino acids

Sequence
(BLAST)

001: MARASVLVVL VVVSVLLYTS RVAESAAANS GSTSFIKAKC SATRYPALCV QSLSVYASTI QKSPKQLAHT ALTVSLAKAQ SAKAFVSKLG KIKGMKAREL
101: EAVQDCLEEM NDSIDRLSRS VQELEEAGKS KGQDFLWHMS NVDTWVSAAL TDDNTCVDGF AGRALDGRVK ASIRGWLVTV AQVTSNALAL VNQFAAKN

Best Arabidopsis Sequence Match ( AT5G62350.1 )
(BLAST)

001: MAKQYLFVLL SISYLLSLEL TAATAASQTG ASKKAINFIQ SSCKTTTYPA LCVHSLSVYA NDIQTSPKRL AETAIAVTLS RAQSTKLFVS RLTRMKGLKK
101: REVEAIKDCV EEMNDTVDRL TKSVQELKLC GSAKDQDQFA YHMSNAQTWT SAALTDENTC SDGFSGRVMD GRIKNSVRAR IMNVGHETSN ALSLINAFAK
201: TY

Arabidopsis Description

Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LVA4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.