Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_16s0022g00860.t01 | Wine grape | extracellular | 78.5 | 78.11 |
| VIT_16s0022g00840.t01 | Wine grape | endoplasmic reticulum, extracellular | 77.5 | 76.73 |
| VIT_16s0022g00830.t01 | Wine grape | endoplasmic reticulum, extracellular | 77.5 | 76.73 |
| PGSC0003DMT400031363 | Potato | plastid | 59.5 | 59.2 |
| Solyc03g083770.1.1 | Tomato | nucleus | 58.5 | 58.5 |
| PGSC0003DMT400072092 | Potato | endoplasmic reticulum, extracellular, vacuole | 57.5 | 58.08 |
| VIT_00s0323g00060.t01 | Wine grape | endoplasmic reticulum, vacuole | 57.5 | 57.21 |
| PGSC0003DMT400031362 | Potato | extracellular | 58.0 | 57.14 |
| Solyc03g083730.1.1 | Tomato | nucleus | 57.0 | 56.72 |
| PGSC0003DMT400031359 | Potato | endoplasmic reticulum, extracellular | 54.5 | 56.48 |
| Bra035897.1-P | Field mustard | plastid | 55.5 | 55.78 |
| CDX87244 | Canola | plastid | 55.5 | 55.78 |
| CDY16779 | Canola | plastid | 55.5 | 55.78 |
| CDX86901 | Canola | endoplasmic reticulum, extracellular, plastid | 54.5 | 54.5 |
| CDY00279 | Canola | endoplasmic reticulum, extracellular | 53.5 | 54.04 |
| Bra010076.1-P | Field mustard | endoplasmic reticulum, extracellular | 53.0 | 53.54 |
| AT5G62360.1 | Thale cress | endoplasmic reticulum, extracellular, plastid | 53.5 | 52.71 |
| VIT_00s0323g00070.t01 | Wine grape | endoplasmic reticulum, extracellular | 53.0 | 51.96 |
| KRH39988 | Soybean | endoplasmic reticulum, extracellular | 51.0 | 49.28 |
| KRH23798 | Soybean | plastid | 49.0 | 48.51 |
| VIT_16s0022g00890.t01 | Wine grape | plastid | 37.5 | 48.08 |
| GSMUA_Achr5P19900_001 | Banana | endoplasmic reticulum, vacuole | 46.0 | 44.02 |
| VIT_00s0323g00050.t01 | Wine grape | extracellular | 43.5 | 43.72 |
| GSMUA_Achr1P04190_001 | Banana | extracellular | 44.0 | 43.14 |
| VIT_16s0022g00960.t01 | Wine grape | extracellular, vacuole | 40.0 | 40.4 |
| GSMUA_Achr4P24680_001 | Banana | endoplasmic reticulum, mitochondrion, plastid, vacuole | 42.5 | 39.17 |
| VIT_01s0011g05410.t01 | Wine grape | extracellular | 39.5 | 38.16 |
| VIT_16s0022g00940.t01 | Wine grape | plastid | 39.5 | 37.44 |
| VIT_11s0016g00590.t01 | Wine grape | extracellular | 34.0 | 36.17 |
| VIT_01s0011g05390.t01 | Wine grape | extracellular | 38.0 | 35.19 |
| Os10t0508700-01 | Rice | extracellular | 32.5 | 30.37 |
| Zm00001d032495_P001 | Maize | extracellular | 33.0 | 30.14 |
| TraesCS1D01G178200.1 | Wheat | extracellular | 32.0 | 29.77 |
| VIT_07s0005g00480.t01 | Wine grape | extracellular | 29.0 | 29.59 |
| TraesCS1B01G200600.1 | Wheat | extracellular | 31.5 | 29.58 |
| TraesCS1A01G180000.1 | Wheat | extracellular | 31.0 | 28.97 |
| HORVU1Hr1G047710.1 | Barley | extracellular, mitochondrion, plasma membrane | 32.0 | 28.07 |
| EER91394 | Sorghum | extracellular, plasma membrane | 31.0 | 27.8 |
| EER91393 | Sorghum | extracellular | 31.0 | 25.94 |
Protein Annotations
| Gene3D:1.20.140.40 | EntrezGene:100260301 | wikigene:100260301 | MapMan:35.1 | EMBL:AM463491 | ProteinID:CAN70288 |
| ProteinID:CAN70288.1 | ProteinID:CCB49315 | ProteinID:CCB49315.1 | ncoils:Coil | UniProt:F6HAN1 | EMBL:FN595506 |
| GO:GO:0003674 | GO:GO:0004857 | GO:GO:0008150 | GO:GO:0030234 | GO:GO:0043086 | InterPro:IPR035513 |
| InterPro:Invertase/methylesterase_inhib | EntrezGene:LOC100260301 | wikigene:LOC100260301 | PFAM:PF04043 | PANTHER:PTHR31080 | PANTHER:PTHR31080:SF19 |
| InterPro:Pectinesterase_inhib_dom | SMART:SM00856 | SUPFAM:SSF101148 | SignalP:SignalP-noTM | TIGR:TC54681 | TIGR:TC55584 |
| TIGRFAMs:TIGR01614 | TMHMM:TMhelix | UniParc:UPI00015CB174 | ArrayExpress:VIT_16s0022g00870 | EnsemblPlantsGene:VIT_16s0022g00870 | EnsemblPlants:VIT_16s0022g00870.t01 |
| unigene:Vvi.12411 | RefSeq:XP_002263991 | RefSeq:XP_002263991.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr16:+:12380440..12381201
Molecular Weight (calculated)
21647.0 Da
IEP (calculated)
8.344
GRAVY (calculated)
0.049
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSSNSAHF LAAFLILFAF HFNSISAAGP AARKDNTEFI RTSCGTTIYP RLCFTSLSAH ANVIQTSPRL LADTALSVTL STARSTSSVM SNLLLSHGLK
101: PREVVAMKDC VEELSDSVDQ LRKAMGEMNQ IKGSNFGLIM NDIQTWVSAA LTYEDTCTDG FAGNTMDGKL KKAVRTRIVK IAHMTSNALA LINSYASFHN
101: PREVVAMKDC VEELSDSVDQ LRKAMGEMNQ IKGSNFGLIM NDIQTWVSAA LTYEDTCTDG FAGNTMDGKL KKAVRTRIVK IAHMTSNALA LINSYASFHN
001: MGESFRLFNH HHFLTTFLII IAMLKLVHTT TTTTTTTTTN TEFVKSSCTF TTYPRLCFSS LSTHASLIQT SPKLMAHAAL NITLASAKVT SAMMVRLSNS
101: RLKPKEVSAM RDCVEELGDT LEELRKSIGE MCQLSGSNYE VYISDIQTWV SAALTDVNTC TDGFEGEDMD GKVKVLVRGR ILVIAHLTSN ALALINHFAS
201: IHG
101: RLKPKEVSAM RDCVEELGDT LEELRKSIGE MCQLSGSNYE VYISDIQTWV SAALTDVNTC TDGFEGEDMD GKVKVLVRGR ILVIAHLTSN ALALINHFAS
201: IHG
Arabidopsis Description
Plant invertase/pectin methylesterase inhibitor superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LVA3]
SUBAcon: [endoplasmic reticulum,plastid,extracellular]
SUBAcon: [endoplasmic reticulum,plastid,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.